G103530


Basic Information

Item Value
gene id G103530
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2533642 ~ 2534131 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU117781
TATTTCACACTTAAAACAATGATTTGGTAATCCTCTTGTACCACTGTCCTCTTTTGTGCTAAGAAATAAGTCTCCTGACAGTTCTCTCCCAAGTGGTTCCATTGTTGTCAGCATTAAGTCTGAGAATGATTCAGTGGGCTATATAACACTTTTAATTGTCAAGAAATTACTTATCTTTAAATGTTTTGGTTCAACATACTTACCTGTTGATCAAATATTGCCTTAAACTTACACCAGAAAATGTATATTTCGTTTTATTTAGTAACTTTTAGGAGGGTGTACTCATTTTTGCTACACAACATTTTATCACCTTGATAAGAAAATCTTATTTTCCTGAATAATTTTGACATGCTTCTTTGGTAATTGATTAAGCAGACTTGCTGGAACATTATATCTCTAAAGAACCCTAACATGTCTTCTAAGTAATTGAGTAATTGCTGACTTTCAGAAGTTTCAGAGGGGGTGTACTCATTTATGCTGTGCACTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117781 True 490 lncRNA 0.33 1 2533642 2534131

Neighbor

gene id symbol gene type direction distance location
CI01000018_02370124_02372215 NA coding upstream 160737 2370071 ~ 2372905 (+)
CI01000018_02344327_02354633 EZH2 coding upstream 178229 2344327 ~ 2355413 (+)
CI01000018_02338151_02342822 PDIA4 coding upstream 190753 2338151 ~ 2342889 (+)
CI01000018_02332183_02336865 NA coding upstream 196719 2332183 ~ 2336923 (+)
CI01000018_02327424_02330396 NA coding upstream 202682 2327424 ~ 2330960 (+)
CI01000018_02864151_02865976 NA coding downstream 330020 2864151 ~ 2865978 (+)
CI01000018_02868921_02905963 NA coding downstream 334790 2868921 ~ 2905990 (+)
CI01000018_03009909_03030542 CSPP1 coding downstream 475778 3009909 ~ 3030609 (+)
CI01000018_03144746_03157987 NA coding downstream 610523 3144654 ~ 3158243 (+)
CI01000018_03168822_03281088 PREX2 coding downstream 634691 3168822 ~ 3281088 (+)
G103529 NA non-coding upstream 1522 2531889 ~ 2532120 (+)
G103528 NA non-coding upstream 6927 2526328 ~ 2526715 (+)
G103527 NA non-coding upstream 8247 2525178 ~ 2525395 (+)
G103526 NA non-coding upstream 9678 2523667 ~ 2523964 (+)
G103525 NA non-coding upstream 11674 2521623 ~ 2521968 (+)
G103531 NA non-coding downstream 4766 2538897 ~ 2539115 (+)
G103532 NA non-coding downstream 5415 2539546 ~ 2539760 (+)
G103533 NA non-coding downstream 83482 2617613 ~ 2778054 (+)
G103604 NA non-coding downstream 268915 2803046 ~ 2803336 (+)
G103606 NA non-coding downstream 284687 2818818 ~ 2819127 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 548331 1924489 ~ 1985311 (+)
G102895 NA other upstream 947980 1582913 ~ 1585662 (+)
G104258 NA other downstream 1156958 3691089 ~ 3691519 (+)
CI01000018_04368179_04375192 NA other downstream 1836055 4368179 ~ 4375866 (+)
G104670 NA other downstream 2221670 4755801 ~ 4759768 (+)
CI01000018_05217404_05218896 NA other downstream 2682549 5216452 ~ 5222616 (+)
G106429 NA other downstream 4347480 6881611 ~ 6886325 (+)

Expression


Co-expression Network