G106380


Basic Information

Item Value
gene id G106380
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6727912 ~ 6728188 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU120909
ATTTTTTTTAAGGTAGATTAGTGCCATCTGGTGGGGTAAAAAAAGAAAAACTTTAGTAATGCCATGTTGTAACCACTAGATTCCTATATAGTTCTATATAAATTGGTTTATAAATTATCTAGTGTTTTTAGACATAAATACTTTTTTTTTTTTTATTGAGTTGTGGATTTGGATTTATACTTAGACATTCTCAAAGACAAGACAAGGTTTAATTTTTTTTATTTATTTTTTTTGTTAAAATGTTGATTTCAAGTGTCAGTTTTTGCATTAATTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120909 True 277 lncRNA 0.24 1 6727912 6728188

Neighbor

gene id symbol gene type direction distance location
CI01000018_06654341_06664818 GABRR3A, GABRR3 coding upstream 63006 6654341 ~ 6664906 (+)
CI01000018_06624871_06636641 KIAA1524 coding upstream 90938 6624871 ~ 6636974 (+)
CI01000018_06609697_06619473 NA coding upstream 107941 6609325 ~ 6619971 (+)
CI01000018_06530603_06532567 AMER2 coding upstream 194837 6529471 ~ 6533075 (+)
CI01000018_06516545_06524220 NA coding upstream 202508 6516545 ~ 6525404 (+)
CI01000018_06774816_06776610 SMPX coding downstream 46628 6772087 ~ 6777049 (+)
CI01000018_06780816_06782576 KLHL34 coding downstream 51211 6779399 ~ 6783813 (+)
CI01000018_06968918_07004161 SH3KBP1 coding downstream 240730 6968918 ~ 7004379 (+)
CI01000018_07011537_07045271 MAP3K15, MAP3K5 coding downstream 282773 7010961 ~ 7045271 (+)
CI01000018_07062582_07063654 NA coding downstream 334270 7062458 ~ 7064264 (+)
G106376 NA non-coding upstream 4382 6723245 ~ 6723530 (+)
G106279 NA non-coding upstream 85773 6640506 ~ 6642139 (+)
G106289 NA non-coding upstream 106467 6621169 ~ 6621445 (+)
G106300 NA non-coding upstream 135081 6592555 ~ 6592831 (+)
G106276 NA non-coding upstream 172486 6549578 ~ 6555426 (+)
G106383 NA non-coding downstream 4083 6732271 ~ 6732541 (+)
G106385 NA non-coding downstream 4844 6733032 ~ 6736576 (+)
G106387 NA non-coding downstream 11041 6739229 ~ 6741818 (+)
G106338 NA non-coding downstream 28252 6756440 ~ 6758884 (+)
CI01000018_05217404_05218896 NA other upstream 1505296 5216452 ~ 5222616 (+)
G104670 NA other upstream 1968144 4755801 ~ 4759768 (+)
CI01000018_04368179_04375192 NA other upstream 2354500 4368179 ~ 4375866 (+)
G104258 NA other upstream 3036393 3691089 ~ 3691519 (+)
CI01000018_01924489_01985310 SEMA5A other upstream 4742601 1924489 ~ 1985311 (+)
G106429 NA other downstream 153423 6881611 ~ 6886325 (+)

Expression


Co-expression Network