G144275


Basic Information

Item Value
gene id G144275
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000027
NCBI id null
chromosome length 10680226
location 10502015 ~ 10502243 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU163901
CTTTACCATGCCTCAGAGAAAACATGAACATGATTTCTTCCTGAGTCTTATCCCGATTGTGATGTCGGGCATCACCGGCTGTGATGTGAAGACCACATGTCCCAAGATTCCGCGCTCAAACTTGCTGTCATCAAGCTACGCCTTTGTTTTGAATAGGCCTCTAGCGGACAGAAATCTTACATATTGCACCTTTAAGACTATAGCACCATCATCTTTGGCCTAAATTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU163901 True 229 lncRNA 0.44 1 10502015 10502243

Neighbor

gene id symbol gene type direction distance location
CI01000027_10437783_10448105 FHL3, FHL3A, FHL3.S coding upstream 53660 10437783 ~ 10448355 (+)
CI01000027_10408345_10410012 NA coding upstream 91653 10406096 ~ 10410362 (+)
CI01000027_10368925_10370031 POU3F1, POU3F1.L, POU3F1.S coding upstream 130710 10368407 ~ 10371305 (+)
CI01000027_10098742_10105152 RRAGC.S, RRAGCA, RRAGCB, RRAGC coding upstream 396707 10098712 ~ 10105308 (+)
CI01000027_10090545_10093306 CX55.5 coding upstream 408269 10090545 ~ 10093746 (+)
CI01000027_10526694_10541815 GNL2 coding downstream 24451 10526694 ~ 10542130 (+)
CI01000027_10545286_10547348 NA coding downstream 43043 10545286 ~ 10547894 (+)
CI01000027_10548922_10551337 GPN2 coding downstream 46679 10548922 ~ 10551652 (+)
CI01000027_10574326_10578596 NA coding downstream 72083 10574326 ~ 10579827 (+)
CI01000027_10580514_10590458 ZDHHC18A coding downstream 77948 10580191 ~ 10590903 (+)
G144266 NA non-coding upstream 14214 10487373 ~ 10487801 (+)
G144265 NA non-coding upstream 14674 10487140 ~ 10487341 (+)
G144251 NA non-coding upstream 42449 10459325 ~ 10459566 (+)
G144063 NA non-coding upstream 98656 10402682 ~ 10403359 (+)
G144125 NA non-coding upstream 112915 10388882 ~ 10389100 (+)
G144285 NA non-coding downstream 22829 10525072 ~ 10525360 (+)
G144300 NA non-coding downstream 52721 10554964 ~ 10555279 (+)
G144305 NA non-coding downstream 95811 10598054 ~ 10598262 (+)
G144296 NA non-coding downstream 118965 10621208 ~ 10636932 (+)
G144298 NA non-coding downstream 137981 10640224 ~ 10640459 (+)
G143033 NA other upstream 772464 9728815 ~ 9729551 (+)
CI01000027_08255251_08264629 NA other upstream 2241189 8255073 ~ 8264897 (+)
CI01000027_08026500_08029412 ENSAB, ENSA other upstream 2469974 8025788 ~ 8032041 (+)
CI01000027_07947743_07951397 NA other upstream 2550073 7947657 ~ 7951942 (+)
CI01000027_07469157_07471720 NA other upstream 3030301 7468964 ~ 7471999 (+)

Expression


Co-expression Network