CI01000034_05491347_05493196


Basic Information

Item Value
gene id CI01000034_05491347_05493196
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000034
NCBI id null
chromosome length 5914002
location 5491055 ~ 5493255 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000034_05491347_05493196.mRNA
ACCATCGACTTTAAACATCAAGTCCATCAGATACATGACATTTGTCTACAACAAGACTCATGGACTGCACAGCCAAGAGAGTTCAACTGCTCCTCTTCATGGCGCTTTTGGCACACCTGGCGCGAGACGCTGAGGGCGTGGCCACCTGCTGCACGAGCTCTTCTAGATCCTGCAAAATGTACGAGTTTCTGTGTCGCGAGGGACGCCGAAACGATACTTCCGTGGCCAGGCATTTCGGTCGCTTTAATAACGACGCAGCCGTCGGGATTCTAACACTTGGCAAACGTAAAGTGGGCGAGAGACGTGTCGAAGACCGCCTGCAGCAACTCCTGCACGGCTCACGGAATCAAGCAGCGGGAATCCTAACTATGGGAAAGAGATTCGAGGATGGCGGGCATCTGCCGCTCGTGCACGAGGGAGGGACAGGGACCGAGAGCGCGCCCGTGAGACTCGGACTGGAGCGTCCGATGAAATATCTGATGCCCACGGTACTAGAAGATTTGGACGCTTATGAAAAACGATGACACTTGTCGCTTTTTAAAACCACATTAGAGATGTTCATTCGTGACGTCAATTGCCAAAACAGAAAGCTATTCTTAATGAGTATTTTGAAATAGCGTTTTTGATTTAAGTAAAAACTGTTTGTGGTTATCATTACTTGAAAGAGACTTTAACGGGTTTTTTTTTTCGAATATAAATCACATGTAGTCATACCTCAGATGTTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTATGTGTGTGTGTGTGTTTTATAAAAGATTGTACATAATTTTACGTAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000034_05491347_05493196.mRNA True 816 mRNA 0.46 2 5491055 5493255

Neighbor

gene id symbol gene type direction distance location
CI01000034_05467255_05480455 KCNH4, KCNH4A coding downstream 10600 5467255 ~ 5480455 (-)
CI01000034_05462429_05465076 NA coding downstream 25979 5462380 ~ 5465076 (-)
CI01000034_05441613_05448148 RAB5C, RAB5B coding downstream 42907 5441538 ~ 5448148 (-)
CI01000034_05428767_05438942 KAT2A coding downstream 51842 5427529 ~ 5439213 (-)
CI01000034_05419465_05426380 NA coding downstream 64675 5418660 ~ 5426380 (-)
CI01000034_05509621_05566772 NA coding upstream 16366 5509621 ~ 5566772 (-)
CI01000034_05601190_05607136 STAT5B, STAT5A, STAT5, STA5B coding upstream 107877 5601132 ~ 5607169 (-)
CI01000034_05681798_05699059 RBTSTAT3, STAT3 coding upstream 188238 5681493 ~ 5699120 (-)
CI01000034_05721684_05742044 NA coding upstream 228308 5721563 ~ 5742044 (-)
CI01000034_05744195_05777951 ATP6V0A1, ATP6V0A1A coding upstream 250769 5744024 ~ 5777951 (-)
G172680 NA non-coding downstream 274053 5211951 ~ 5217002 (-)
CI01000034_05176199_05177220 NA non-coding downstream 277003 5175614 ~ 5177220 (-)
G172719 NA non-coding downstream 329928 5160849 ~ 5161127 (-)
G172716 NA non-coding downstream 335370 5155486 ~ 5155685 (-)
G172714 NA non-coding downstream 338360 5152029 ~ 5152695 (-)
G172771 NA non-coding upstream 19273 5512528 ~ 5512796 (-)
G172696 NA non-coding upstream 35644 5528899 ~ 5535870 (-)
G172692 NA non-coding upstream 46630 5539885 ~ 5557975 (-)
G172776 NA non-coding upstream 84188 5577443 ~ 5577774 (-)
G172782 NA non-coding upstream 233126 5726381 ~ 5765635 (-)
G172593 NA other downstream 496112 4992960 ~ 4994943 (-)
CI01000034_04216451_04218876 NA other downstream 1273313 4216212 ~ 4221881 (-)
CI01000034_04165535_04172272 KCTD13 other downstream 1318885 4165373 ~ 4172272 (-)
G172151 NA other downstream 2093242 3391144 ~ 3451802 (-)
G172016 NA other downstream 2254440 3234963 ~ 3236615 (-)
G172800 NA other upstream 295777 5789032 ~ 5789738 (-)
CI01000034_05795972_05811363 NA other upstream 304315 5795835 ~ 5811781 (-)

Expression


Co-expression Network