CI01000050_02153699_02173737


Basic Information

Item Value
gene id CI01000050_02153699_02173737
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2153409 ~ 2174335 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02153699_02173737.mRNA
ACATTGGGAAAATAGAGATCACAATAATAAAATCTATAAACATAATATATAATTGATGGATCAGCACACAGCTAAAGATGAGTGACACCTCATTTTATAAATGTGCAAAATGAATCAGTCAGCAGTGTATTTATACAGTTACCATGGGAACCGCTGATCTCTATCTTTAAAATGATTGTGATGCACTGAAGAAACACTTCATTAAACTCTTGAGTCAGTTAAAAACATTATAAAATTACGGTTCTGGAAAAAAAAACGTAAAACTAAGCCTTTGAAATAATAGAATCGTTCTGTGAAAATCTGTGTAAAATAACACTTAATAATGAGTTTTATCTGCTCGTGTCTGTTCTGTCTGGGTTTGCGTGTTCATTAAAAATGTGTGAAATAGTTTTACTTCCCTCTCTATTAACACACTCTCTCTCTCTCTCTCTCTCTCTCACTTTATCTCTCTCAGAGGAAGTGGGCATCTCTGTCACATTTAGCAGTTCATTTTAAGGATGCTTCCAGGAAACATTCAAACTCATCTGAACACTTCAGAAGAGCTTCAGAAGAACTGAATCTACTGACAACAGAGAAGATCATTTAATAAGAGAGAAGGATGAGGATCATCTTGACTTTCACTCTGCTGATGATTCCTGGTGTCGTGAGCTCCATGAGTGTGACAGGATATTCAGGAGGAGGAGTCACGATCACATGCAAATATGAGACAAAAAATACAGCAAAGTCTTTTTGTCGAGGTGTCGTGAGCTCCATGAGTGTGACAGGATATTCAGGAGGAGGAGTCACGATCACATGCAAATATGAGACAAAATATGCACCAAATGAAAAGTCTTTTTGTCGAGGTGATCAGAGGTCCACATGCTCTGAGACTAAAGATAAATGGGTTAATTCTGGAAGATTCTCTCTGTATGACAACACAAGTTCAACAGTCTTGAAAGTGACCATCAGAAATCTGAGTGAAGAGGATTCTGGGACGTACAACTGTACATTTGGTAGAACTAGAGGAAAAGATTCCTACACTGAAGTGAATCTGAAGGTTATAACAGATCAACAAAACAGGAGTGTGAGAGGATATTCAGGAGGAAACGTCATTATAAACTTCAAATATAAGATGAAACACAAGAACAATGTGAAAGTCTGTAAAACTGCAGCAGATCAATGTTTTACTGTAATGAACACTAACAGAGCAGCAGAACAGAAACATGACGGACGATTCGCCGTTTATAATAACAGATCTGCAGATCTCTTACGTGTGTTTATCAGAGAGCTGAATGTGAACGACTCTGGAGAATATAACATTACAGTCAAAGTTTCTGAAGACTACAGTATCTTCTCTGAGTTTAATCTGGACATCAGAGACGATGATTGTTGTGTGAAGAGCATCAGTCTATCAGCTGCTGCAGGAGCATCTGTGAACATCAGCTGCAAATACCCACAATCCCATAAAAGAGATGTGAAGTTTCTCTGCTGGAGATCTGGAGATAATCTCTGTGCTGAAGAGACGTCTGTGAAGGAGAGCAGAAGATGGAGTCCTGAGGGAAAGATCCAGCTGTATGATGACAGAAAAGAGCAGCTCCTGACGGGAAGAATCAGTCATGTGACTGAACAACATTCAGAATACTGGTGTGGAGTTCAGTCTGATCAAGGACACAAGAGCTTCATCACACGAGTCCTGATCAACCCTACAGTCAAAACTTCACCAAGCACAGGCGTTTCCAGAACTTCTACATCACTGGCATCTCCAAACATATTAGCAGGCTCTTCTCTGATCATCCCTCTGGTTCTGGTTCTTCTGGTTCTGATCTTAGCTGGACTCTTATTACTGTTTTTCTGTAAGAAGCGTCAGTCTCAAGGCGGTGATTCGTCATCTCAGACTGGACCAGGAAAACATGAAGTGGTTTCTCACACTGGTTGTGATTATGAGGAGATTAAAGTCACTCACAAACAGTTACCCACAAACCCCTCTGATTCTTCTAACTGCGTTTACGCTACAGTTCAGAAAGCCACTGGTGACTCTCAGTGCTGCATCACATCTGCTGAGGATCTGAATTACGCAGTGGTGAATTTCCACAAGAAATCTGACTGTCCTGACAGTGTCAGTATCAGGAATAATCAGGATTACAGTGAATACACTGCTGTCAATTATCTCACTGCTTGACGAACAACAGCAGAGAATATAAATGAGCTGAATGTTTTATCACCTTGTCTTTGGTATTAAGTTTGTGTGTTTGGTGTTTTTTGTTAGTCTTCAGTGATGCTCCTTTTCCTTATATTTTAGTCAGTCTTGTGAATCAGACTTTTGACTGTTGGCATGAAGTCTGATAAATGTTTAAATGACAGCGCAGTGTTTTGTTCTGCAGATGACAATGAAAGAAATGATCAGAAGCTTTTGGTCAGAGTTTGATGTAAATAAGTACAGAATGTTTCAGACAAAAGTGTAAAATTAAA

Function

NR:

description
Polymeric immunoglobulin receptor, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02153699_02173737.mRNA True 2448 mRNA 0.39 9 2153409 2174335

Neighbor

gene id symbol gene type direction distance location
CI01000050_02146025_02148567 NA coding downstream 4797 2145941 ~ 2148612 (-)
CI01000050_02057680_02112564 NA coding downstream 40672 2056980 ~ 2112737 (-)
CI01000050_01933295_01972409 NA coding downstream 181000 1933108 ~ 1972409 (-)
CI01000050_01909688_01930238 NR5A1A coding downstream 222831 1908981 ~ 1930578 (-)
CI01000050_01820586_01825230 FGF17 coding downstream 326683 1820333 ~ 1826726 (-)
CI01000050_02187334_02202572 NA coding upstream 12976 2187311 ~ 2203138 (-)
CI01000050_02213867_02218971 NA coding upstream 39243 2211730 ~ 2218986 (-)
CI01000050_02230904_02233429 NA coding upstream 54530 2228865 ~ 2233429 (-)
CI01000050_02332320_02334175 BCL2L16 coding upstream 157844 2332179 ~ 2334175 (-)
CI01000050_02393197_02400057 LMO4A, LMO41 coding upstream 218501 2392836 ~ 2400057 (-)
G213905 NA non-coding downstream 28663 2119359 ~ 2124746 (-)
G213893 NA non-coding downstream 51893 2101197 ~ 2101516 (-)
G213888 NA non-coding downstream 57653 2095505 ~ 2095756 (-)
G213887 NA non-coding downstream 58225 2094969 ~ 2095184 (-)
G213664 NA non-coding downstream 75718 2076617 ~ 2077691 (-)
G213931 NA non-coding upstream 29321 2203656 ~ 2203870 (-)
G213934 NA non-coding upstream 33451 2207786 ~ 2208226 (-)
G213943 NA non-coding upstream 72521 2246856 ~ 2247164 (-)
G213978 NA non-coding upstream 163854 2338189 ~ 2338424 (-)
G213704 NA other downstream 836303 1312983 ~ 1317106 (-)
G213497 NA other downstream 1157750 983478 ~ 996539 (-)
G213429 NA other downstream 1323607 829342 ~ 829802 (-)
G213174 NA other downstream 1900347 235551 ~ 253062 (-)
G213171 NA other downstream 2135428 16080 ~ 17981 (-)
G213948 NA other upstream 154178 2328513 ~ 2331316 (-)
G214017 NA other upstream 287841 2462176 ~ 2464698 (-)
G214027 NA other upstream 382831 2557166 ~ 2572902 (-)
G214314 NA other upstream 1239113 3413448 ~ 3424257 (-)

Expression


Co-expression Network