CI01000050_02332320_02334175 (BCL2L16)


Basic Information

Item Value
gene id CI01000050_02332320_02334175
gene name BCL2L16
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2332179 ~ 2334175 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02332320_02334175.mRNA
ATGGGACTGTCGGATAACGCTGTGATCGGCCGTGGCCTGAACAGTCCTGACCCGCTGGTGCGTGAGGCCTATTTGATGGCGTACGACTATATCAACTATGTGACGGCCAAACCTGGCGTCCCGTTGGGTCCAGCACCATCCCGTGCCACGGCCGCCCTGCGTCACGCTGGAGATGAGCTGCTCGCTCGCTTCCCAATCTTCTTCCGCCGCTGGCCGCGTGTTTTCCAGGACGTGACGGACCGAACGGCCTGCTCGACCCTGGTTTCCATCCTGGACGAGCACTTTGCACCCACACGACGTAGAGAGCTGGCCTGGAGCGCCGTGCTGTCTGTGTTTGTCCTGGCTGGACAGCTGGCACTGCACTGCCAGGAAAGGGGCATGTCTGCTACCCTGCCCCAGATTCAGGAGTGCGTGGGTAGCTACGTAGAGAGGGTCATCTGCCCGGAGATCAGGGAAAGAGGAGGATGGTCAGGTTTTATCAGTCGTTTTGGCGAGAAGCAGAATCTTGAAGACCAGGTGATGCGGGTGTGCTGCTGGTCTCTGCTCTTGCTGTGTTTTGGGATCTTTTCCTACTTTGTATGGACGAGAAGGAAAACTTAGACAACAGCGCCATCTGCTGAGTAAATGTAATAAGGACACTAATGATTCGCTTGGTTGTGTAAGATTGCTAATATATTACTGGTTTTGAAGCTATAACCCCAAATTGTTATATCAATTGTTAAATTAACTGTGAAGAATAAA

Function

symbol description
bcl2l16 Predicted to enable protein heterodimerization activity and protein homodimerization activity. Acts upstream of or within several processes, including calcium import into the mitochondrion; gastrulation; and positive regulation of cysteine-type endopeptidase activity involved in apoptotic process. Located in mitochondrion. Is expressed in somite.

NR:

description
Apoptosis regulator Bcl-X

GO:

id name namespace
GO:0007015 actin filament organization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02332320_02334175.mRNA True 741 mRNA 0.53 2 2332179 2334175

Neighbor

gene id symbol gene type direction distance location
CI01000050_02230904_02233429 NA coding downstream 98750 2228865 ~ 2233429 (-)
CI01000050_02213867_02218971 NA coding downstream 113193 2211730 ~ 2218986 (-)
CI01000050_02187334_02202572 NA coding downstream 129041 2187311 ~ 2203138 (-)
CI01000050_02153699_02173737 NA coding downstream 157844 2153409 ~ 2174335 (-)
CI01000050_02146025_02148567 NA coding downstream 183567 2145941 ~ 2148612 (-)
CI01000050_02393197_02400057 LMO4A, LMO41 coding upstream 58661 2392836 ~ 2400057 (-)
CI01000050_02407311_02413917 NA coding upstream 72265 2406440 ~ 2413917 (-)
CI01000050_02449354_02450013 NA coding upstream 115161 2449336 ~ 2450622 (-)
CI01000050_02488032_02496421 STAMBPB coding upstream 153536 2487711 ~ 2497255 (-)
CI01000050_02503125_02509915 NA coding upstream 168417 2502592 ~ 2510038 (-)
G213943 NA non-coding downstream 85015 2246856 ~ 2247164 (-)
G213934 NA non-coding downstream 123953 2207786 ~ 2208226 (-)
G213931 NA non-coding downstream 128309 2203656 ~ 2203870 (-)
G213978 NA non-coding upstream 4014 2338189 ~ 2338424 (-)
G213979 NA non-coding upstream 5319 2339494 ~ 2339751 (-)
G213983 NA non-coding upstream 21681 2355856 ~ 2356189 (-)
G213988 NA non-coding upstream 32962 2367137 ~ 2367442 (-)
G213998 NA non-coding upstream 84362 2418537 ~ 2418769 (-)
G213948 NA other downstream 863 2328513 ~ 2331316 (-)
G213704 NA other downstream 1015073 1312983 ~ 1317106 (-)
G213497 NA other downstream 1336520 983478 ~ 996539 (-)
G213429 NA other downstream 1502377 829342 ~ 829802 (-)
G214017 NA other upstream 128001 2462176 ~ 2464698 (-)
G214027 NA other upstream 222991 2557166 ~ 2572902 (-)
G214314 NA other upstream 1079273 3413448 ~ 3424257 (-)
CI01000050_03491159_03514757 NA other upstream 1157161 3491088 ~ 3514757 (-)
G214436 NA other upstream 1191641 3525816 ~ 3589057 (-)

Expression


Co-expression Network