CI01000050_02213867_02218971


Basic Information

Item Value
gene id CI01000050_02213867_02218971
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2211730 ~ 2218986 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02213867_02218971.mRNA
ACTGTCTGCAGGAGTATGAATCCACCTGAATCAGTACTAAAATTTAAAACCTCAGTCACAAGTGGTCCTTCGAGCCAGAGCTCGAATTACTGCAGAGAACTGACATCTCGACCAGAGTCAGAGCTTGCAGTTATCTGCCCCAGACGACTTGTAAAGCCATCTGCATATCTAGCAGACTTCCAAGTACAAAGACCTGGATCTGAGAGGAGATCCAAGGAATCTGCATGTTCCAGTGATGATGAAGCAAATGCTGAAGATCCTCCACTTGTCTTCAAACAACTTCATCCATATGCTGAACCCATCCACTGTGATCAGTCCAGAGACAACTACTATCTATACTTGGGTGTCAGAGAGTCCTATCCTACACGACGATCTGAGGACGTACCCAGATCTGCAGTGCCTTGCTTCCAGGAGAGAACCTACAGAGGACCGAAGCCATCTATAGCCTCCATGATGACATCAGATCCAAGAGAGTTTTCAAGGTTGTGCACGGCATTAGAGAACCTCTTCCCTGACGAAGCCACAGAACGTTTCAAGTGTCAGATCCTCACAAATCATCTACAATTAGACTGTGGGTCGCATGTGTCACGACTTCGAATTAGACTCCCTCATAAGCTGAGAACTAGCTTCAAGAGATACATACACTCACTGAAGGTAACTATACCTACTCTCCTCGATTTCTCTAACTGGTTGGAGTACGAGCTCCAAGTACAAGATGATAGCTCCAAGAGGACAGGTCTGCCACCAGAACCCAGAAGTAAGAAAAGGCAGGACCGCCGTAACCCAAGGGCTTTTAGGAAACCAACTTGCATCTTGCTGGGCACAGAGAAACCCATGACTGGGAGTGAAATTCAAGCAGCCGCTCAAGAGGTAACATCTAAATCTGCCAGATTCAAAGGGAGATTGCATGCATATTGCCCCTATTGTGACAATGCCAATCACTTCTTAAATGGGTGTGCCAATTTCAAAGAGCTCACTAAAGAACAGAAGGAATCTTGGATCCTCTTATTCACTCTGTCTCTTGTCACTAACCGACACAAGAAATTCCCCATTCAAGGTGCCTTCACAGCCGAAAGTCTCGCTGAGCAAACTCACACTGTTGTTGGCTGGATTGCCCGAGTTCAGCCTGTACTGCTAATTGGCTCAGATTGTCCACACCTTGTTACCCCAGTTGAGCCTGTTCGCCTAGGCCCTCCAGGTGGCCGTTTAAGATGCTGCAGTGAGACAGAATTGGATTGTATCCATCCCATCGCCCTTGCTCCTCAACATCCTGTGACCAAACTCATTATCAAGGATTATGATGAGAAGCTGCACTACCCTGGGATGCCGTACGAGTTAAGTGATCAAGGCACTAACTTCAAGGGTGGAGAACGAGAGCTGAATGAATCCTTTGCTGCCTTGCATCATGAGCTACAAGGCTCTTCTCTGATCATCCCTCTGGTTCTGGTTTTTCTAGTTCTGATCACAGCTGGACTCTTATTACTGTTTTTCTGTAAGAAGCGTCAGTCTCAAGGCGGTGATTCGTCATCTCAGACTGGACCAGGAAAACATGAAGTGGTTTCTCACACTGGTTGTGATTATGAGGAGATTAAAGACACTCACCAACAATTACCCACAAACCCCTCTGATTCTTCTAACACTGTTTATGTCACTGCCCAATTACCCACAAGCCTCTCTGATTCTGCTGCTACAGTTCAGAAAGCCACTGGTGACTCTCAGTGCTGCATCACATCTGCTGAGGATCTGAATTACGCAGTGGTGAATTTCCACAAGAAATCTGACTGTCCTGACAGTGTCAGTATCAGGAATAATCAGGATTACAGTGAATACGCTGCTGTCAATCATCTCACTGCTTGATGAACAACAGCAGAGAATATAAATGAGCTGAATGTTTTGTCACCTTGTCTTTGGTATTAAGTTTGTGTGTTTGGTGTTTTTTGTTAGTCTTCAGTGATGCTCCTTTTCCTTATATTTTAGTCAGTCTTGTGAATCAGACTTTTGACTGTTGGCATGAAGTCTGATGAATGTTTAAATGACAGCGCAGTGTTTTGTTCTGCAGATGACAATGAAAGAAATGATCAGAAGCTTTTGGTCAGAGTTTGATGTAAATAACTACTGAATGTTTCAGACAAATTGTAAAATTAAA

Function

NR:

description
hypothetical protein EH28_18286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02213867_02218971.mRNA False 2146 mRNA 0.45 8 2213578 2218986

Neighbor

gene id symbol gene type direction distance location
CI01000050_02187334_02202572 NA coding downstream 10440 2187311 ~ 2203138 (-)
CI01000050_02153699_02173737 NA coding downstream 39243 2153409 ~ 2174335 (-)
CI01000050_02146025_02148567 NA coding downstream 64966 2145941 ~ 2148612 (-)
CI01000050_02057680_02112564 NA coding downstream 100841 2056980 ~ 2112737 (-)
CI01000050_01933295_01972409 NA coding downstream 241169 1933108 ~ 1972409 (-)
CI01000050_02230904_02233429 NA coding upstream 9879 2228865 ~ 2233429 (-)
CI01000050_02332320_02334175 BCL2L16 coding upstream 113193 2332179 ~ 2334175 (-)
CI01000050_02393197_02400057 LMO4A, LMO41 coding upstream 173850 2392836 ~ 2400057 (-)
CI01000050_02407311_02413917 NA coding upstream 187454 2406440 ~ 2413917 (-)
CI01000050_02449354_02450013 NA coding upstream 230350 2449336 ~ 2450622 (-)
G213934 NA non-coding downstream 5352 2207786 ~ 2208226 (-)
G213931 NA non-coding downstream 9708 2203656 ~ 2203870 (-)
G213905 NA non-coding downstream 88832 2119359 ~ 2124746 (-)
G213893 NA non-coding downstream 112062 2101197 ~ 2101516 (-)
G213943 NA non-coding upstream 27870 2246856 ~ 2247164 (-)
G213978 NA non-coding upstream 119203 2338189 ~ 2338424 (-)
G213979 NA non-coding upstream 120508 2339494 ~ 2339751 (-)
G213983 NA non-coding upstream 136870 2355856 ~ 2356189 (-)
G213988 NA non-coding upstream 148151 2367137 ~ 2367442 (-)
G213704 NA other downstream 896472 1312983 ~ 1317106 (-)
G213497 NA other downstream 1217919 983478 ~ 996539 (-)
G213429 NA other downstream 1383776 829342 ~ 829802 (-)
G213174 NA other downstream 1960516 235551 ~ 253062 (-)
G213171 NA other downstream 2195597 16080 ~ 17981 (-)
G213948 NA other upstream 109527 2328513 ~ 2331316 (-)
G214017 NA other upstream 243190 2462176 ~ 2464698 (-)
G214027 NA other upstream 338180 2557166 ~ 2572902 (-)
G214314 NA other upstream 1194462 3413448 ~ 3424257 (-)

Expression


Co-expression Network