CI01000050_02187334_02202572


Basic Information

Item Value
gene id CI01000050_02187334_02202572
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2187311 ~ 2203138 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02187334_02202572.mRNA
ACAATAATAAAATCTATAAACATAATATATAATTGTTGGATCAGCACACAGCTAAAGATGAGTGACACCTCATTTTATAAATGTGCAAAATGAATCAGTCAGCAGTGTATTTATACAGTTACCATGGGAACTGCTGATCTCTATCTTTAAAATGATTGTGATGCACTGAAGAAACACTTCATTAAACTCTTGAGTCAGTTAAAAACATTAAAAATTACGGTTCTGACAAAAAAAAACCCTGTAAAACTAAGCCTTTGAAAAAAAATCATTCTGTGAAAATCTGTGTAAAATAACACTTAATAATGAGTTTTATCTGCTCGTGTCTGTTCTGTCTGGGTTTGCGTGTTCATTAAAAATGTGTGAAATAGTTTTACTTCCCTCTCTATTAACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGAGGAAGTGGGCATCTCTGTCACATTTAGCAGTTCATTTTAAGGATGCTTCCAGGAAACATTCAAACTCATCTGAACACTTCAGAAGAGCTTCAGAAGAACTGAATCTACTGACAACAGAGAAGATCATTTAATAAGAGAGAAGGATGAGGATCATCTTGACTTTCACTCTGCTGATGATTCCTGGTGTCGTGAGCTCCATGAGTGTGACAGGATATTCAGGAGGAGGAGTCACGATCACATGCAAATATGAGACAAAAAATACAGCAAACTCTTTTTGTCGAGGTGATCAGAGGTCCACATGCTCTGAGACTAAAGATAAATGGGTTAATTCTGGAAGATTCTCTCTGTATGACAACACAAGTTCAGCAGTCTTGAAAGTGACCATCAGAAATCTGAGTGAAGAGGATTCTGGGACGTACTACTGTACATTTGGTAGAACTAGAGGAAAAGATTCCTACACTGAAGTGAATCTGAAGGTTATAACAGGTCTCTTACGTGTGTTTATCAGAGAGCTGAATGAGAACGACTCTGGAGAATATAACATTACAGTCAAAGTTTCTGAAGACTACAGTATCTTCTCTGAGTTTAATCTGGACATCAGAGACGATGATTGTTGTGTGAAGAGCATCAGTCTATCAGCTGCTGCAGGAGCATCTGTGAACATCAGCTGCAAATACCCACAATCCCACATTAGTGATGTGAAGTTTCTCTGCTGGAGATCTGGAGATAATCTCTGTGCTGAAGAGACGTCTGTGAAGGAGAGCAGAAGATGGATCCATGAGGGAAAGATCCAGCTGTATGATGACAGAGAAAAGCAGCTCCTGACGGGAAGAATCAGTCATGTGACTGAACAACATTCAGAATACTGGTGTGGAGTTCAGTCTGATCAAGGACACAAGAGCTTCATCACACGAGTCCAGATCAGCGTTACAGTGTCTGGTGTTGCAGCATTAGTGTGGTCATTTGGATGGAGTAGAAGTGCAGGTTTTAGTGCTGCTACTTCCAAGTGCAAAGACCTGGATCTGAGAGGAGATCCAAGCAACCTGCATGTTCCAGTGGTGATGAAGCTAATGCTGAAGATCCTCCACTTGTCTTCAAACCATCAGGCAGATAACAGAGAAGGTGAGGGACTGCACTGTTTCACCAAGCTTGATCAGCCTCAAGCTACGTCAAGGTATCGTACCCCATCTATAGCCTCCATGATGACATCAGATCCAAGAGAGTTTTCAAGGTTGTGCACGGCATTAGAGAACCTCCTCCCTGACCAAGCCACAGAACGTTTCAAGTGTCAGATCCTCACAAATCATCTACAATTAAACTGTGGGTCACATGTGTCACAACTTCAAACCCCCTGTAAGACATGCCATAGGAAACACCTCTGTATACTGCATTATGTAAATGGACGGACTGAAGATAGCAAAACTGAAACGGACACTAAAGACAACTCCTGTCTGGTTAACACCACCAAGGACACCCTGTATGTAGATCGCTCTATCTACAGCCACAAGGTTCGTCTAAAGGCCGGATGCTACAAGGCCCTACACAAGATCAAGCACAGGCTCAACACTCACCAATGCCTCTTTACTGCCATCTCCCCCAATGCTGATCTGTTTGATCAAGTGGCAAAGCAATGGCAGGTGGATGTAATTCCATACAACAGTGAGGAAGTAATGATGCAGTCAAAATTTTATCAAGAGGCCATCAGACTTTTACAAGACAAAATTGTGAGAGTTAACGTGGATGGTGTCATTCGGTATGCGACGCCATTCCTTCGCATACAACACATGCCAACTCTGCACATGTCAAAAGAAGCTGTTATGCTGCAGCTAAGAAGCGTTGAGCGAAAGCTGATGAAGAACCCTGATCAGGCCTGTGCTTACAAAACTGAGATTGAGAGACTTAAGAATGCTGGCTATGTGGAGAAACTGCAACCATGCGAGGCTGAGACATTACAAGAATCATGGTACATCCCTCACCATATGGTCCCACTTCCTGATGACAAACCTTTACTTCGGTTCCTGTGGAGAGATATAACCTTAGATCAAGCACCAGATGTGTACCAGTGGCAGATACTTCCCTTTGGGACTCCCCTGCAGTCCCTGTTGTGCAACATTCTCCCTGCAAAAGCATGTGCTAGACCACAGTCAACCAGGAGATCAGATGGGGGTGGTGATAGAAAGACGTCCTTCTATGTTGACAATTGTCTACGCAGTCTCACATCCACATATGTCGCCAAAGACCTTGTTGATCAGCTCCGTGCCCTCCTAAATGAGGGAGGCTTTGAATTGCGACAATTCTACGACTGTGCTTGCCTGGCTGTTGTCAAGTTCTTGTTGTTACAAGGTGTTTGTGGGAACTCAGGAAGCCAGTGGAATCAAAGTCCTTCATTTCTCAAACTGCCGCCAGTGAATTGTCCCGAGCAACCTTCCTTGCCTGCTGAAGAAAAGAGTGGCGAACTAAGGCAGTCTGCATTTTGTGAATCGACTACAGTTATACCTTTGCCAAATCCACAGCAGTATGGCACACTGGCCGATTTAATAAAGGGATGCAGTCAGCAGCTTTATGGGGTGGTGAACATTACATGCACTGACAAACACAGAGAGGTAGAACAAACAGTGCTTTGTCACATACAGATTGAATCCTTCCCTACCGAGATGGTCCAACTGAAGTTCAGGAAACCAGTATCAGGTGCAAGCAGGCTGGCTTCTCTCTCTCCTGAGTTTGACCCTATCACTGGACTTATTTGTGTAGGTGGCCGTTTAAGATGCTGCAGTGAGACAGAATTGGATTGTGTCCATCCCATCGTCCTTGCTCCTCAACATCCTGTGACCAAACTCATTATCAAGGATTATGATGAGAAGCTGCATTACCCTGGGCTCTTCTCTGATCATCCCTCTGGTTTTGTTTTTTCTGGCTCTGATCACAGCTGGACTCTTATTACTGTTTTTCTGCTGCAACGATACATGAGCAAAATACAGATATTTGATGACTGTGTGAAAAAATGTACACAAGACATCAGTGTTGAATTGCGATATAATGTAATTAATTTAGGATGCTTGTTTTTGGCAGGTGGTGATTCGTCATCTCATACTGGACCAAGAAAACATGAAGTGGTTTCTCACACTGGTTGTGATTATGAGGAGATTAAAGACACTCACCAACAATTACCCACAAACCCCTCTGATTCTTCTAACTGCGTTTACGCTACAGTTCAGAAAGCCACTGGTGACTCTCAGTGCTGCATCACATCTGCTGAGGATCTGAATTACGCAGTGGTGAATTTCCACAAGAAATCTGACTGTCCTGACAGTGTCAGTATCAGGAATAATCAGGATTACAGTGAATACGCTGCTGTCAATCATCTCACAGCTTGACGAACAACAGCAGAGAATATAAA

Function

NR:

description
hypothetical protein EH28_18286

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02187334_02202572.mRNA False 3820 mRNA 0.43 15 2187311 2203138

Neighbor

gene id symbol gene type direction distance location
CI01000050_02153699_02173737 NA coding downstream 12976 2153409 ~ 2174335 (-)
CI01000050_02146025_02148567 NA coding downstream 38699 2145941 ~ 2148612 (-)
CI01000050_02057680_02112564 NA coding downstream 74574 2056980 ~ 2112737 (-)
CI01000050_01933295_01972409 NA coding downstream 214902 1933108 ~ 1972409 (-)
CI01000050_01909688_01930238 NR5A1A coding downstream 256733 1908981 ~ 1930578 (-)
CI01000050_02213867_02218971 NA coding upstream 10440 2211730 ~ 2218986 (-)
CI01000050_02230904_02233429 NA coding upstream 25727 2228865 ~ 2233429 (-)
CI01000050_02332320_02334175 BCL2L16 coding upstream 129041 2332179 ~ 2334175 (-)
CI01000050_02393197_02400057 LMO4A, LMO41 coding upstream 189698 2392836 ~ 2400057 (-)
CI01000050_02407311_02413917 NA coding upstream 203302 2406440 ~ 2413917 (-)
G213905 NA non-coding downstream 62565 2119359 ~ 2124746 (-)
G213893 NA non-coding downstream 85795 2101197 ~ 2101516 (-)
G213888 NA non-coding downstream 91555 2095505 ~ 2095756 (-)
G213887 NA non-coding downstream 92127 2094969 ~ 2095184 (-)
G213664 NA non-coding downstream 109620 2076617 ~ 2077691 (-)
G213931 NA non-coding upstream 518 2203656 ~ 2203870 (-)
G213934 NA non-coding upstream 4648 2207786 ~ 2208226 (-)
G213943 NA non-coding upstream 43718 2246856 ~ 2247164 (-)
G213978 NA non-coding upstream 135051 2338189 ~ 2338424 (-)
G213704 NA other downstream 870205 1312983 ~ 1317106 (-)
G213497 NA other downstream 1191652 983478 ~ 996539 (-)
G213429 NA other downstream 1357509 829342 ~ 829802 (-)
G213174 NA other downstream 1934249 235551 ~ 253062 (-)
G213171 NA other downstream 2169330 16080 ~ 17981 (-)
G213948 NA other upstream 125375 2328513 ~ 2331316 (-)
G214017 NA other upstream 259038 2462176 ~ 2464698 (-)
G214027 NA other upstream 354028 2557166 ~ 2572902 (-)
G214314 NA other upstream 1210310 3413448 ~ 3424257 (-)
CI01000050_01820586_01825230 FGF17 coding downstream 284091 1820333 ~ 1826726 (-)
CI01000050_01739921_01780306 NR2C2 coding downstream 330511 1739700 ~ 1780306 (-)
CI01000050_01725724_01732620 NA coding downstream 377816 1725709 ~ 1733001 (-)
G213666 NA non-coding downstream 35061 2072968 ~ 2075756 (-)

Expression


Co-expression Network