CI01000050_02407311_02413917


Basic Information

Item Value
gene id CI01000050_02407311_02413917
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 2406440 ~ 2413917 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000050_02407311_02413917.mRNA
GCGGCCCGAGGCTGTTCCCGTCCGTGCTCGTGTCCCCCGTCTCTGCCCTCCTGTCCGCTCGGAGTGAGCTGGGTGTTGGATGAGTGCGGCTGCTGTAAGGTGTGCGCCCAACAGTATAACCAAGACTGCGGCCCTGACCGACCCTGTGACCACATCAAGGGCCTGCGCTGCCACCTAGGGGCCGGAGGAGACCCTCGCCGTGGACTCTGTAGAGCTGACGCTCAGGGGCGTCCGTGTGAGTTTGGTGGGCGTGTGTATCAGCACGGAGAGGATTTCCAGCCCAGCTGTCAGCACCAGTGCAGCTGTATGGATGGTGTGGTGGGCTGCATGCCTCTGTGCCCACACAACATCCCTCTGCCCAGCACACACTGCACCAACCCTCGCCTGGAGACGCTGCCGGGCCGCTGCTGTGAGGAGTGGCTGTGTGACCATGATAACAGCATCAGTGAAGAGCCGCCGGACCCCCGTCCTCAACACACCCCGTCCAACCACATCAGCAAACTCCTGCAGAGCCCCGACAGCTTCCTGTCCAGGAGGGGCTCCTTTCAAGAGTGGGCGTCTGTGCCGGTGTCTCTGGTTCCCTTCCCAACATCCAAATGCTTCCCACAGACCACTGGCTGGTCAAAATGTTCTGCTTCCTGTGGGTTTGGCATCTCAAGTCGAGTGACCAATAGTAATGCACAGTGCAGGCTGGTTAGAGAGACACGCCTTTGCCAGATCCGAGAATGTGACATCACTCCAGCTATGAAGAAGAAGCCAAAGACTCAAGCTTTGCATGTCACATGGCATGGACTGGATCAGAGTTTTGAGTGGAGTGAAAGCAATTTCTACAAAAAGCACACTGTATTCACTCCGCTCCAGATCCACTCTGGGTTTTCCATTTCCCACTCACTAAAAGGAAAGAAGTGTCGACAGACAGTTAGGCCTCGGGAACCAGAGCAGATCACGTTCGCCGGCTGCTCTACGGTTCGCCGCTACCGGCTTCGTACCTGTGGCTCATGTGTGGATGGCAGGTGCTGTCAGCCGTCCGCATCCCGCACGGTGCGTCTGCGATTCCGCTGCCCAGACGGCGAGAACATCACACGAAATGTCATGTCGATCCAGCGCTGCCGGTGCAGCAAAAGCTTCTGCAGGCTTCAGAGAGAGCTTTCCTCACCCACCGTCAGCCTTCACAACGACATACACACCTTCTCTCACTGAACACACACTCCTACATTCAACGCGCCATCAATGCATAATGGCTAAAAATCACTTTTTTTTTTTACACCCGTTCTCAGGGATGTTTCCTGAACTATAGAATAGTAAACTTCTCCTCTCTCAGCTGCTGCATTTCAGTGCTCCATGTCACCGCCCTTCTGTTCTAGATTTGTATAGTTATTGCACTTTGTGTTTCTCTTTTGCTTTTGCTTTGGCCCTGTTCTGGTGTGAAACTCATGAAAACATGTCCAGGTCACATTTCTTGACAGATTTGCCCTCCTCATATGCACCTGGACATTGTTAAGTGTTGTTTGCCCATGTTTCCACTTCTGCTTTTATTTATTCTGCTATTTTTAGCTTTGAAGTGTTTTATTGATTCTCGAAGGATAAGTGAATATATTTGGCTTCAGATTAATGACTTCCTGTCACTCGAAGGTTAAGAAAATGCACTAGTATTGAGGGTGGTGAGATTGTGTTACAGATATTATGTACATCACTGAATGAGTTACCTGATTGTTAAAGGATAAAATGAAGATGAGACTTTTTTTTTTTTCGCTTTTAAACTAATATATTTTCTGTCCATTCTTTATATGCAGAGTTTTTACTTTGTATACAGATCTCTTTTGCAATTTTAACAAGTTTATGTGTGGAAGAAAGCAATGATGGAGACTGTTTTAGTACAGTGGAGACTTGCTTTGTCTTTTGTACAGTGTACAGGCTTCACTATAGGTGGAGTGACTCTTTGAGACTGCTTCATTTTTCGGGGCATACTTTAGATTCTAGACGCTCTCTTGTATAGGAGTGAAGGACTATTTGTATAGTTAAGATGATGAATATAAATTACTTTGCTGATCAATTTGTGTCAAAAAATAAA

Function

NR:

description
Cyr61 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000050_02407311_02413917.mRNA True 2071 mRNA 0.49 5 2406440 2413917

Neighbor

gene id symbol gene type direction distance location
CI01000050_02393197_02400057 LMO4A, LMO41 coding downstream 6383 2392836 ~ 2400057 (-)
CI01000050_02332320_02334175 BCL2L16 coding downstream 72265 2332179 ~ 2334175 (-)
CI01000050_02230904_02233429 NA coding downstream 173011 2228865 ~ 2233429 (-)
CI01000050_02213867_02218971 NA coding downstream 187454 2211730 ~ 2218986 (-)
CI01000050_02187334_02202572 NA coding downstream 203302 2187311 ~ 2203138 (-)
CI01000050_02449354_02450013 NA coding upstream 35419 2449336 ~ 2450622 (-)
CI01000050_02488032_02496421 STAMBPB coding upstream 73794 2487711 ~ 2497255 (-)
CI01000050_02503125_02509915 NA coding upstream 88675 2502592 ~ 2510038 (-)
CI01000050_02528520_02596972 TCF7L1B, TCF7L1, TCF7L1A coding upstream 114603 2528520 ~ 2596972 (-)
CI01000050_02752537_02755836 COX5B.1, COX5B1, COX5B coding upstream 338115 2752032 ~ 2755922 (-)
G213988 NA non-coding downstream 38998 2367137 ~ 2367442 (-)
G213983 NA non-coding downstream 50251 2355856 ~ 2356189 (-)
G213979 NA non-coding downstream 66689 2339494 ~ 2339751 (-)
G213978 NA non-coding downstream 68016 2338189 ~ 2338424 (-)
G213943 NA non-coding downstream 159276 2246856 ~ 2247164 (-)
G213998 NA non-coding upstream 4620 2418537 ~ 2418769 (-)
G214000 NA non-coding upstream 5659 2419576 ~ 2419787 (-)
G214005 NA non-coding upstream 8074 2421991 ~ 2422214 (-)
G214007 NA non-coding upstream 8874 2422791 ~ 2423073 (-)
G214009 NA non-coding upstream 9688 2423605 ~ 2425469 (-)
G213948 NA other downstream 75124 2328513 ~ 2331316 (-)
G213704 NA other downstream 1089334 1312983 ~ 1317106 (-)
G213497 NA other downstream 1410781 983478 ~ 996539 (-)
G213429 NA other downstream 1576638 829342 ~ 829802 (-)
G214017 NA other upstream 48259 2462176 ~ 2464698 (-)
G214027 NA other upstream 143249 2557166 ~ 2572902 (-)
G214314 NA other upstream 999531 3413448 ~ 3424257 (-)
CI01000050_03491159_03514757 NA other upstream 1077419 3491088 ~ 3514757 (-)
G214436 NA other upstream 1111899 3525816 ~ 3589057 (-)

Expression


Co-expression Network