G213630


Basic Information

Item Value
gene id G213630
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000050
NCBI id null
chromosome length 7556436
location 1650814 ~ 1661180 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU242362
GGATGAACTAACCTTTAATGAATCACAAGGATTCGCTGGGTGACATGACCATAAATAATAAAATTACTTCCTTGAAGTGACCATCGTACCCTTAGCTAACAGCCTTGTGGAAGGTCCCTTCATGAAGGGATTCAGTTGTTCACTTTCGTTTGGAAAACCCCTACAAATGACGTCCCCTTCTCGAAGTGCCCTTCAAGGGTGCAAAAACGCCCTTTATTGAATGGCTTAAAATCACTTGACAAGACTTAAAAACATGTGAAAACAATAAAGTTTATTGAGAGAGCAGCATTAGCCCGATTATTAAGATAGGTGGTTATAGTTTTAGGGGGGCTGAGATGACATATTGGGGGGCTAAAGCCCACCTAAAAACGGCCTAGAACAGCCCCTGGATTCAATCAATTTCTGAAGGACAAAATCAACTCCTGCCCTACATTTTCCTCCTTCCAGAAGGATATTTATCACAATAGGGAAGAAAAGACCAGAGCAACTTCCGCTTCATGCCGACTTTAAGCGTTTAGAATGTCCTGCTGTTTATTGATTGAAATACTGCAGCAGGTGCTGCATATTGATCCCAACTTGCATTTTGTTCTCATATTTTTTGTTTTTCTTCTTTTGAAAGGTGATCTAAATATTCATGGCTTGAAACAGAGAGAGAATTGGCAGGCCTGTGCTGCAGATGTTTTGCCCTATAGGTCTCCACACCAGTCATGTGACTGAAAACTATACTGCACTCTATGCCATTAGAATCCGAGTGATCAATGAAATATTGTTGAATTTTCCAATAAAATCTAATATATGTGCATTTCTTAATACAATATCAAGACATTTGGTGGCAAGAACAGTTTTATTTATCAACTTTGTCCCTAAGGACATTAATCATGTCATTAGCCTACCCTGCGGTACAGAGGCCTCCCTCTCAGACTTGGTAATACCACATAGTAGTGGCATTAATGTATTTACAAAGAAATCAAAATGTCAGAAAACAATAAATCACATGCTAATGAATGTGTTTGTTTTCATGCACAAAAACTGCTGACTGATTGTCATGACAACGGCAAGTTTTGTAGCGGCGAACAAAAGTAGCTTTAGAGCGGCCTCTAACAAAAGAAAAGGCAAAATAAAGAGAAAATTTCAAGAGGGATAAATCGCCAGAATAACATCACTATCTTCATCAGCGATACTGATACAAACTCTCATGCATAACAACATTACTTGTAGGCAGGATTCCCATGAATCAGGTAGTATTTTTCAACAACACAACAAGTCGTAATTGCTCATATTTAAACCCCTATGCTGGGAGAATGATAAACAGAATGCATACTGAAAATTTTCTGTTAATTTAGACTGCTCAGTTTTATTTGAGCACATTTTTAACAGCAATGTCTGCCACTGCAACAACAACAACAAAAAAAACTTTTCAGCCAGGAAAGATTTAAAGATGGAGAAGATAAGATAGAAGACAGCAACAGAGTCATTCAATAAAGTTGTGCTTTAGTTCCTTCATACCAGAAGGCTATTCTGGTGCAAATATTATTAAAAAGCAAATGCAACTTCATTGTAAAGCATCAGACTTAACTGTAAAAATGCAGAGGTATGTATCAGTCTTCCTCTCCTTCCATATAGTTTAATTCAACATAATGCATTTAACACATCCTAAAAGCCTGCCTTATCATTATACTGATAAGCATTTAATAATACAATAAATGATTCTTAGCTTGATAATCCAGATATTCTAATAATAATCTTATAATTACATTGATCAGTTTATTGATATATATACATGCAGAACTCAAATTTTTATGGATCATTTACATTGTGTATGCCACCCAGTAGATGACATTGACCACGGCAAAGGTGAAAGGGAAGACAGCCCGAGCGTAGATATCGATGGTGTCGGCGTCAATGGGTTTACACTTGCAGCATTTCTTCTCTTCACTGCTTTCCTTCTGTGCCCGACGGGATTGAGTGCCACGAACCTCGGTCTCTTCGCGCGGCTCTCCAGAAGGGTCAGTGGTCCGCTGGGCCCTGCTTTGCCTGTTTGAGATGAGCAGGCCCTGGTTCATGCCAGTCACAGAGAGCGAAAAGAGAACCATGGCCTGCTTCCCATTTTTCACCATGGACTATGTTTTTATTCGTCTTGACTTTGGCTTTCTCCTTCTTGCTGTAGTCTGCATTATAGTGAGCAAAAGCGTATTCGATCAAGGCAGCGAAGACAAAGACATAGCAGATCCAGAAATACACGTCCAGAGCTTTAATGGCAGAAGCGCGGGGCAATGATGAACGAGCACTGACCATCAGCGTTGTCATGGTGAGCACCGTTGTGATTCCTAAGTTGAATGGACACACAGAACACCAATATTCATTTATTTATCAGGTTAATTTGTGTGTGATTGTGTTAAATGTTCTCATTTAATTTGACTGATTTTTTAAAAAATTCTTTAGTGAAGTTTACATTTTATAAACTGTAAATGTTATCAAATTAGCACTATTCCCAGCTGACAAAAATATGTTCTAAGAACGTTTTGCTAACATTCCTATTAAGTTATGAAAATGTTATTTCTGCATGTTCTCTGAATGTTTAAAACATCCTGTTTTTAAAAAATGTTTTTTCTTGGTTATGCGAACGTTAAGGGACCATTTCATTCGATTATTCTTCAAACATTATCGGAACGTTACTTTTGAATGTTCTCTGAATGTTCTGAAACAAGTAGTAACATTTAAAAAATGTTACATGAACATCCAACTAAATGTTTAAAAAAAAAAAAGTTCCATGGACGATGTATAAGTAATGTTTTTGTGCTAACATTTTGAGTAGATTATTAAAGATCAGATATTGTCATTGAATGAACATTCTATTAATGTTTCTGGAAGAATGTTTGTTTAACATTAAGAGAATCTTGCCAGAACATTAACTAAAGTTCTGAGAACGTTCCCTGTTAGCTGGGTTAACACTTAAACACAGACCTAAAGACACTCTTGCAGGCACAGCTGATTGGCTGATCCAGAATGAAACCCATGACATGGCAACCAGTAGGATGGAGGGCATGTAGGACTGGATGATGTAAACTCCTCGGTTTCGCCTTAGTTGGAATCGTAAGCTGAGACGTGGAAATCTCCCCGCTGTTTCAAGAATGACAATACTTGGCTTTTAAATATGATATAGCTTTTGAGTTAACAAAACTGATTAAAACCATTCAAAATTATAACAGTTGCCACAGCATTAGCAATTAATATTTTGTTAGAGTTTAGTTATATCAGATATATCAGACAATGTTGATGAAAAGCCTCAAAGCCTCACCGGATTTAAAGTTCAGCAGCTCCGTGACAAAGCGATAATCTGTGATGGTGAACTGGGACAGCTCCAGTTTGTCCAGCCCATGAATGATTTTTTGACTCTCTGACCAGTGATACACAATGTCCTCTGAAGAGTAGCCGTCTGCAAACCAGCTTTCCAAGTCTAGCATGCATTCCTGTTCATCCATGGGGTATTTGGTGAGGTCCATGTCACATGCAACTGTAGATGTAATTCTGAAAGGGAAAACATCACGATAAACATTTCAAACATGGAGCAGGTCACAGAGGAGAAATTAACCATCTGTTAAGACACTGGAAAGCTTGTAAAATATATGATCCTTTTAAAATGATATTGAACATTCTAGCTTTGCTGTTCTGCCCATTATTGCCAATGCAAAAACTCAAACTAATCTGAAACACATTTAAAACATGCCCACGAACCGACTGCTGTAGAGAATGACTCCATCAGGCTGCAGGCGTATGAGTTTGTTCTCCACAGTAACATCATGAAACCAGGCTGATTTGGCGTTAACAATGAATGTGTCTGGTACCCAGAGTTTGTCTACGAAGCGGCTGTCCAGGCCGAGAGTTTTGTTCGTGTAGTTGTAGGACAGACGGTCATCTCTCCAACTCTGCCGCAGAAATACCGTCATGGTGTATTCCTGTCAACACAAATGCACACAAACAAAACATCTACGGTTTTATGTTGTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242362 True 4006 lncRNA 0.38 3 1650814 1661180

Neighbor

gene id symbol gene type direction distance location
CI01000050_01596404_01631248 NA coding downstream 19566 1596286 ~ 1631248 (-)
CI01000050_01563629_01592766 CFAP74 coding downstream 57802 1563455 ~ 1593012 (-)
CI01000050_01513337_01523389 GNB4, GNB1, GNB2, GNB1.S, OL-GB1, GNB1A, GNB1B coding downstream 127182 1512826 ~ 1523632 (-)
CI01000050_01447924_01453746 EXORH, RHO coding downstream 196978 1447422 ~ 1453836 (-)
CI01000050_01319798_01336147 NA coding downstream 314118 1319090 ~ 1336696 (-)
CI01000050_01715475_01720169 MRPS25 coding upstream 53888 1715068 ~ 1720943 (-)
CI01000050_01725724_01732620 NA coding upstream 64529 1725709 ~ 1733001 (-)
CI01000050_01739921_01780306 NR2C2 coding upstream 78520 1739700 ~ 1780306 (-)
CI01000050_01820586_01825230 FGF17 coding upstream 159153 1820333 ~ 1826726 (-)
CI01000050_01909688_01930238 NR5A1A coding upstream 247801 1908981 ~ 1930578 (-)
G213791 NA non-coding downstream 12627 1637829 ~ 1638187 (-)
G213760 NA non-coding downstream 89173 1561232 ~ 1561641 (-)
G213750 NA non-coding downstream 187184 1462459 ~ 1463630 (-)
G213644 NA non-coding downstream 225919 1415114 ~ 1424895 (-)
G213663 NA non-coding downstream 255769 1393013 ~ 1395045 (-)
G213801 NA non-coding upstream 60 1661240 ~ 1661582 (-)
G213649 NA non-coding upstream 1035 1662215 ~ 1663376 (-)
G213802 NA non-coding upstream 4579 1665759 ~ 1666041 (-)
G213803 NA non-coding upstream 8020 1669200 ~ 1669426 (-)
G213676 NA non-coding upstream 19326 1680506 ~ 1681137 (-)
G213704 NA other downstream 333708 1312983 ~ 1317106 (-)
G213497 NA other downstream 655155 983478 ~ 996539 (-)
G213429 NA other downstream 821012 829342 ~ 829802 (-)
G213174 NA other downstream 1397752 235551 ~ 253062 (-)
G213171 NA other downstream 1632833 16080 ~ 17981 (-)
CI01000050_02230904_02233429 NA other upstream 571468 2228865 ~ 2233429 (-)
G213948 NA other upstream 667333 2328513 ~ 2331316 (-)
G214017 NA other upstream 800996 2462176 ~ 2464698 (-)
G214027 NA other upstream 895986 2557166 ~ 2572902 (-)
G214314 NA other upstream 1752268 3413448 ~ 3424257 (-)

Expression


Co-expression Network