RNA id: XM_043256278.1


Basic Information

Item Value
RNA id XM_043256278.1
length 3740
RNA type mRNA
GC content 0.46
exon number 33
gene id map4k5
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14243402 ~ 14267479 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtgtgtgaggtctgGTGATCTGGCTTCAGTTGAAGTTAGTTTGCGCTTCTCTCTGTTCCTGTTTGGATGGTTATTTCGACGCAAAATGAACTTCGGCGTTTAGGAAAACTTTAAATCTTAATGAGTTCCGAGGACAACGATTAATCGCACAAATGGGGGATGTGGACCGCAGGTCTGTTGTAAAACTGAATCTGGGTCATTAAAGTAGTAAATCCTCCAGTCCGACAGCATGGATCCGCTGGCCCGGTCCGGAGGGGAGATTCAGCGCAGAAACCCGCAGCACGACTTTGAGCTGATCCAGAGAGTTGGCAGCGGGACCTATGGAGATGTGTATAAGGCTCGTAACATCTCTACTGGAGAACTTGCAGCAGTGAAGATCATCAAACTTGAGCCCGGTGATGATTTCTCAATCATCCAGCAAGAGATTTTTATGGTGAAGGAATGCACCCATCACAACATTGTGGCTTACTTTGGCAGCTACCTTTGCCGTGAGAAGTTGTGGATTTGTATGGAATACTGCGGTGGAGGATCCTTACAAGACATTTATCAtgTTACAGGTCCGCTCTCTGAACTTCAGATCGCTTATGTGTGCAGAGAGACATTACAGGGTCTCGCTTATCTGCACTCCAAAGGCAAAATGCACAGAGATATCAAGGGGGCGAATATTCTGCTCACTGATAATGGAGATGTCAAATTAGCGGACTTTGGAGTGGCCGCTAAAATAACGGCCACCATGGCAAAAAGGAAATCCTTCATTGGGACGCCCTACTGGATGGCTCCAGAGGTGGCGGCAGTGGAGAAGAATGGAGGTTATAATCATCTGTGTGATATCTGGGCTGTTGGAATCACATCAATAGAACTAGCAGAACTACAGCCTCCCATGTTTGACCTCCATCCCATGagGGCTTTATTTCTGATGTCTAAAAGCAACTTCCAGCCACCCAAGCTAAAGGACAAAACCAAATGGTCCACAGCCTTCcataattttgttaaaatttcGCTCACAAAAAACCCGAAGAAGAGGCCAACAGCTGAGAAGCTGCTCTCTCACTTATTGGTGGCACAGACAGGTTTGACTCGACGGTTAGCTTTAGAGCTACTAGATAAGATGAACAACCCAGATAATCATCAATCTCACTTCAGCCAAGGGGATGAAGATGACTTGGAGCCACTTGCACAGCGCCACACCATTCGCTCGTCCCACAGCAGGAGCTCTCGTGCTGAAAGGACCCAGTCTCAGATCAACTTTGATAGGCTTCAGTTTGAGCCCCCTATGAGGAAGGAGACTGAAGCAAGTGCTGAGATGGATGTAACTAAGGACAATGATTTCTCCTCCCCTTGGAGCCCATTCACAGAGGGCCCCATCACCTCCAGAGGGCACTTGGCTCCATTAGAAGATGCTTTTGAGGATGTTGATCTTTCAACTCTTAAACAGGGAGTGCCACCACCGCTTCCTCCTAAGCCCTCTCAGGTTCGGTCGAGCAGTGTGTCCGATGAGTTTGGTTTGAACGACGGCTCTCAGACGGTGCGGAGGTTCGCAAGCTCTGATAACGGGCCTATACCAGTATCTCGCAGACAGAGCACACCTGAGAGAGGAAGTAACGCAGAACACACCCACTCAGACTACATGTCTGTGAGCGTCAGCAGCCCAGGGTTGCTCTCACACACCGCCGACCACGAGGACGATTCGGATGAAAGCGTAAATGGAGATGTTTCAAAATCACCTCCTGGTCGACCccagaggaaagaaagaaaagattttcCTAAACCTGCTATTAATGGCCTGCCGCCCACTCCCAAAGTCCTGATGGGAGCTTGTTTCTCAAAGGTTTTTGATGGTTGTCCTCTTAAAATTAACTGTGCCACTTCATGGATTCATCCAGATACAAAAGACCAGTATCTGATATTTGGCACTGAAGATGGAATCTACACTCTGAACTTAAACGAGCTGCATGAAGCCACCATGGAGCAGTTGTTTCCACGGCGGTGCACGTGGCTGtacataatcaataataatctGATGTCACTGTCAGAAGGGAAGACGTTTCAGTTGTACTCCCATAATCTGATTGGGCTGTTTGAACAGCTCAGGAAACCTGGACTGGCCACTCAGTTCCACACCCACAGATTCCCTGACAGGATACTGCCCAGGAGATTTGCTCTCACCACCAAGATCCCCGACACCAAGGGATGCCACAAGTGTTGCATCGTGCGGAATCCGTACACGGGTCACAAGTATCTCTGCGGAGCTTTGCAGTCTGGGATTGTTTTACTGCAGTGGTACGAACCCATGCAGAGATTCATGCTTATAAAGCACTTTGATTTCCCGTTACCAAGTCCGCTGCGTGTGTTTGAGATGCTGGTGGTCCCTGAGCAGGAGTATCCTTTGGTGTGTGTGGCAGTCAGTCAGGGCACAGAGCCGGGACAGGTGGTTCGCTTCCAGACCATCAACCTCAATTCCTGCTCATCCTGGTTCACAGAAATCGGCTCGGGTGGTAACCAGGTAGATGCCATCCACGTGACACAGTTAGAGAGAGACACCGTGCTTGTGTGCCTGGACAAGAACGTAAAAATAGTGAACTTGCATGGAAAGCTAAAGTCTAATAAGAAACTTGCATCTGAGCTGAGCTTCGATTTCTGTGTCGACTCCGTAGtgTGTCTCCAGGACAGTGTTCTGGCCTTCTGGAAACATGGGATGCAAGGAAAAAGCTTCAAATCAAACGAGGTTACACAGGAGATTTCAGACCCAAGCAGAGTGTTCAGACTCCTGGGATCAGACAGGGTTGTTGTTTTGGAGAGCCGGCCTACAGATAACCCTACCGCTTTCAGTAACCTCTACATCCTGGCCGGACACGAGAACAGTTATTAGCTCCGCCTCCTCCAGCCGTTCAAGGCCCGCTGCACCTTGGAGCCGTCGCGGTACCCACGATGCATTCTCTTCGGAACGGCACCGGCGCTGGACAACCACAGCTGAGCTGATGAGCAGACTGTGTTTTAGTGCTAAATCTCACTGCAGCCTTACGCTATACGCTGCCCACAGCCAGAGACAGCCAGACTTCTCACCACTTCAAGCATCCAGAATCAAACATCATGCAGTTCTACAGCAAccagtcagattttttttttttttgtacatcgAGCAATCAGTCGCCAGAACTGCAAGCAATAGCGCTCTATGTTAAATACCTGTTATTTTTTAAACCctattaattattgtaatcattctaaacatttaaaaaaaatattaaagctgcAAAGATGGAACATTGAGCAAAAAGCTTTGCTGCTCAAAAAGTGCCATACAAGGGAACGGTTTTATTAAACGTAACTAACTTCAGAGGTTTCGTGTTAATTGTAGATTTAAAATGTCAGGTTTTCATGCCtgttaatggggagagttttgGGAGAATGAGTGAGTGTTATTTATTCAGCGGAGTCATGTGAGTGAAGCATCTCGCCCTCATGTTACTGAATGAATAGTTTTCTGCTGCAGGTCATTTTCTATGTTGTAGCTCTTTTTATTTCCTCCAGCtgagtaatattttaaaactttagttATCTCTTTTCAAAAGTAACTTTAATTCAATACTTGCACCATGTAAGCACTTTTGTACAtgttctttttgtatttaaaaaatgacaaaacatggGAGATGTGAGGTTACTGTGATATCTCAAGTGTTTCCGTtgctttagttttaatgtaTGCAGCTTTTGTAATAAAAAGGCAATTGTTAACA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0008349 MAP kinase kinase kinase kinase activity molecular_function

KEGG:

id description
K08833 MAP4K5, KHS1; mitogen-activated protein kinase kinase kinase kinase 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU138967 lncRNA downstream 53498 14187539 ~ 14189904 (-) True G93905
TU138968 lncRNA downstream 53498 14187539 ~ 14189904 (-) False G93905
TU138970 lncRNA downstream 53498 14187539 ~ 14189904 (-) False G93905
TU138971 lncRNA downstream 53498 14187539 ~ 14189904 (-) False G93905
TU138913 lncRNA downstream 338700 13903754 ~ 13904702 (-) False LOC122356386
TU139118 lncRNA upstream 604954 14872432 ~ 14873014 (-) True G94003
TU139135 lncRNA upstream 713518 14980996 ~ 14995700 (-) True G94016
TU139147 lncRNA upstream 758234 15025712 ~ 15036994 (-) False lmbrd1
TU139165 lncRNA upstream 960036 15227514 ~ 15231255 (-) False col9a1b
TU139177 lncRNA upstream 977053 15244531 ~ 15248584 (-) False col9a1b
XM_043256284.1 mRNA downstream 132 14236100 ~ 14243270 (-) False cdkl1
XM_043256283.1 mRNA downstream 132 14236100 ~ 14243270 (-) True cdkl1
XM_043256282.1 mRNA downstream 11080 14227198 ~ 14232322 (-) True l2hgdh
XM_043255288.1 mRNA downstream 19276 14209375 ~ 14224126 (-) True sos2
XM_043255294.1 mRNA downstream 42963 14196471 ~ 14200439 (-) False cdkn3
XM_043256135.1 mRNA upstream 9918 14277396 ~ 14285372 (-) True sav1
XM_043256230.1 mRNA upstream 18291 14285769 ~ 14305538 (-) True nin
XM_043256419.1 mRNA upstream 39552 14307030 ~ 14314868 (-) True pygl
XM_043256289.1 mRNA upstream 47752 14315230 ~ 14333812 (-) False trim9
XM_043256292.1 mRNA upstream 47752 14315230 ~ 14333806 (-) False trim9
TU138948 other downstream 79054 14160323 ~ 14164348 (-) True srsf5a
TU138949 other downstream 79054 14160323 ~ 14164348 (-) False srsf5a
TU138950 other downstream 79054 14160323 ~ 14164348 (-) False srsf5a
TU138946 other downstream 160644 14079532 ~ 14082758 (-) True LOC122356235
TU138915 other downstream 331565 13910339 ~ 13911837 (-) True G93875
TU139176 other upstream 973272 15240750 ~ 15242797 (-) False col9a1b
TU139178 other upstream 983097 15250575 ~ 15253281 (-) False col9a1b
TU139278 other upstream 1297139 15564617 ~ 15583917 (-) True G94128
TU139299 other upstream 1374553 15642031 ~ 15642503 (-) True G94147
TU139376 other upstream 1485169 15752647 ~ 15755060 (-) True nkx2.3

Expression Profile