RNA id: XM_043223688.1


Basic Information

Item Value
RNA id XM_043223688.1
length 1308
RNA type mRNA
GC content 0.55
exon number 10
gene id wdr77
representative False

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 1017009 ~ 1022861 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tattttgaagagcgCTCGCGCAGGAAGCGGAAGTACAGCGCGCGCGCGTGTCTCTTTCATTCATTGCGGGAGTTTGCCGTAGTTGAGTGGGATATTAATAAATCGCAAAGTGTTGAGAGTTGATCATGATCAAGGAGAACTGCTGGAATATTCCGGTGAACGCTCCGGCGTGTATGGAAAGACACCTGGACGCGCTCGATTACAGAGCAGacggCGCTCTGCTGCTGGGGGCGTCCAGTCTGTCAGGTCGCTGCTGGCAGGGCTCGGTGTGGGTGTACAGTGACCCTAAGCTGGCTCCCAGCGAGGGTTTCTGTAAGGCGGGTGTTCAGACTGAAGCGGGGGTCTCAGATGTTCTCTGGATCTCAGAGCGGTCTCTGCTGCTGGCGTCAGACGCAGgctctGTGGAGCTGTGGGAGCTGGCGGAGGACGAGCGTCTGCTGCTGAACCGGTTCTCTCGTCTGGAGCATGATGACGTGGTGTCGGGGGTCAGTGTGAGCGCCGGCGGGCAGCACGCGGTCAGCTGTAGTGTGGACTGCAGGATCAAGGTGTGGGATCTGAACCAGGAGACCGTCACCAGCTCCTACAGCGctcaTTCTCAGCCGGTCAGTGGTGTGTCGTGTTCTCCTGTGGACGAGTCCCTCTTCCTGTCGTGTGCTCAGGATGGACGGCTTTTGCTGTGGGATACACGgaaacccaaacctgcctctcgTCTggTGGTGTCTCCGAGCTGCAGCCCCACCGCCGTCGCCTGGCATCCTCACCAGAGCAGCTCCATCGCATACGgtgatGAACTGGGTCGAGTGACTCTCAGGGATCTGCAGACTTCTAACGGCGTGCGGACGATAAACGCTCACAGCCGCCGCGTCTCCAGACTGACGTTCTCCTCCGACAGTTCACCCCTGTTGGCCTCTATCAGTGACGACTGCTCCGTTGCCGTGGTTACTGCAGAGCTCAGAGAAATTTTCCGGGACCGGCGGCACCAGGACTTCGTGCGCGGGGTGTGCTGGGTCCCGGGCGGCTCGAGCGTGTTGACCACCGTGGGCTGGGACCATCAGGTGCTGCACCACAGCGTGTCTGTGCCCTAGAGCATCATGGGAAAACACATCAACCTCTAATTCATTCCCATTTCTCTTGTTCCATCACCATCAAATAATGTCTCATGAGTCACATACATAATCATATTAGGaacataaattcataaatgtgttttttaatcacAGAAATGGGCATAAATGCTGTTCACCTCACATTTGAGCAAACAACATATTTCACAAACTTCACTGTTTAATAAAGTTTCTGTTATCTGTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU218746 lncRNA upstream 5373 1009390 ~ 1011636 (+) True G148033
TU218713 lncRNA upstream 123786 892589 ~ 893223 (+) True G148002
XR_006247765.1 lncRNA upstream 187894 825151 ~ 829115 (+) True LOC122328050
TU218691 lncRNA upstream 267362 749048 ~ 749647 (+) True G147984
TU218563 lncRNA upstream 290763 724669 ~ 726246 (+) True G147898
TU219024 lncRNA downstream 27824 1050685 ~ 1050910 (+) True G148219
TU219058 lncRNA downstream 160659 1183520 ~ 1190524 (+) True G148226
XR_006247759.1 lncRNA downstream 313257 1336118 ~ 1338916 (+) True LOC122328044
TU219094 lncRNA downstream 317376 1340237 ~ 1359295 (+) True G148251
TU219099 lncRNA downstream 356038 1378899 ~ 1428291 (+) True G148255
XM_043223662.1 mRNA upstream 16622 991165 ~ 1000387 (+) False camk1ga
XM_043223660.1 mRNA upstream 16625 989338 ~ 1000384 (+) True camk1ga
XM_043223661.1 mRNA upstream 16625 989338 ~ 1000384 (+) False camk1ga
XM_043223676.1 mRNA upstream 27802 984839 ~ 989207 (+) False si:ch73-352p18.4
XM_043223723.1 mRNA downstream 7490 1030351 ~ 1036117 (+) True si:ch211-103a14.5
XM_043223825.1 mRNA downstream 90303 1113164 ~ 1121666 (+) True LOC122328115
XM_043223674.1 mRNA downstream 99989 1122850 ~ 1124930 (+) True LOC122327961
XM_043223675.1 mRNA downstream 99989 1122850 ~ 1124930 (+) False LOC122327961
XM_043223827.1 mRNA downstream 111610 1134471 ~ 1136105 (+) True LOC122328116
TU219018 other upstream 342 1015779 ~ 1016667 (+) True G148214
TU218551 other upstream 223003 791234 ~ 794006 (+) True G147888
TU218692 other upstream 265500 750279 ~ 751509 (+) True G147985
TU218561 other upstream 290242 726400 ~ 726767 (+) True G147896
TU218610 other upstream 357395 653880 ~ 659614 (+) True G147937
TU219065 other downstream 102625 1125486 ~ 1127230 (+) False G148233
TU219066 other downstream 102740 1125601 ~ 1127230 (+) True G148233
XR_006247738.1 other downstream 114856 1137717 ~ 1148802 (+) True LOC122327965
XR_006247739.1 other downstream 114856 1137717 ~ 1141809 (+) False LOC122327965
TU219053 other downstream 356430 1379291 ~ 1384847 (+) True G148222

Expression Profile