RNA id: XM_043225224.1


Basic Information

Item Value
RNA id XM_043225224.1
length 8551
RNA type mRNA
GC content 0.45
exon number 24
gene id myt1b
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 7684304 ~ 7765052 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATGAAATAGAGTGTGCATGGCTGTACACATGCCCGCTGAGTTATTGCGGGGGGATATTCAAAGCCCAGCCCATCGATGTTGTAGGTTTTACTACAGCTTTCGTGATGTCATGGCAAAGGGCGGAGGGAGGAGGTGGGGGACAATGGCTCATGAGGGAAAGCTTACTGAACACACGACGAAGACGAGAGAAGCGTCTGGCGGAGGAGCTTTCGGGATTATTGTTGTCTTTTTCACTCAGAAAATGAGTACCGGGGGAAACTCCTGAACCAGCGCTGGACGCGAGGAGACAAGATCAGCCGCTGCCGGCCCTCTCTCAGACTGCAGAGCCGACCAATCAAAATGAGTTTGGATACTGATGACAAGCGCACTCGCACACGGTCCAAAGCAGGAAGAGTTCCCTCGGAGATTGTTGGACAGGAGCTGAGCTGCCCTACTCCAGGATGCAATGGCTCAGGCCATATCAGTGGCAAATATGCCCGACACAGAAGTGCTTTGAGTTGCCCATTGGCCAGAAAAAGGCGCCTACAGGAAGCAGAGTCAGAGCTACCTGCCTCCAAGAGGAAGTCTCACCCTCTGAAGCTGGCGATGGATGAAGGATTCAACGCAGAGAGTGAGGGAAGCGGAGAGGAGACGGAGCTGAGggaggaagatgaggaggaggaagaacaGGCAAAGCAGAAAGCTAGCCATCAGGAGTGTGAAGAAGAGGAGCAAGCCACGCAGAACACAGAGAGCACCAACACAGAGGAAGAAGATGGAGATGAAGAGGAGTGCATCATCATTGAGGCATCCAGCACAGAGAAGCCCCAGCTCTCATCCTCTGAGGATCTCTCAAACTATCAGCACATAGTGGCCAACTCAATGACGCCCCTCAACAACGGTGCCATGTCACCCCAACAACAACAGTCCATCACAGTGGAAACACAAGATAAAAGCCCTTTCAGGGAaccagaagaagaaaagaaagaagacgATGAAACAAAAGAAACGAGGAACCAAGTAGGAGTTCTGATGTCACAAGAGGATGGAGTGATGAAAGGTGAGATTAAAGATGAAGAAGAGGACATGCACGCTGAGAGCCAGAGGGAGTCAGACCACCAGTATTTTACTGAGGAGATGGAGACACAACAGgctgaagaagaagatgatgaagatgatgatgatgatgatgatgatgatgatgatgaggtgTTGAGGTCTGAGATTAAAAGAGAAGAAACATACAAGGAAGTTAAGTCTGAAGAGGAAGGGGAGAGAAACACCACCCCTTCGGTTATCACTGCCACTCAGGGATCTCACGTAAGGGAAGACTATGTTTCCCATAAACTTGCATTGCCAGAAAGCTACGGCTCTAGCAGTAAAGCCGCCGCAGCATCTCCTGTGGTTATCGAAGTTCAGTCTGAGGAGTCCGAGAGGGATGCTGACATGGATGGTAACGATGACGATGGTGACGACGACAGCTTGTCTCAGCGATCAACGGTGGCGGACGAGTCTGAGATGTTTGACATAATGCGGGGGAACTTGGGGTTGCTGGAGCAGGCCATTGCTTTGAAAGCCCAACAGGTCAAAGCTCATCGTGAGCTCAGCCGCATTCCTGAACACCACCGCTTCTTTCCTCTCGACGACCGGTCCGGCAAACACATGGAACATATCCGCAAGAGCTGCTTTGGAAAAGAGAGTTCTAGatcagagaagagagagatcaAATGCCCAACCCCTGGGTGTGATGGAACGGGTCACGTGACGGGACTTTATCCCCACCACCGCAGTCTGTCAGGCTGCCCACACAAAGATCGGATCCCTCCAGAGATTTTGGCCATGCACGAGAATGTCTTGAAGTGCCCAACGCCAGGCTGCACTGGTCAGGGTCATGTCAACAGCAACCGAAACACACATCGCAGTTTGTCCGGATGTCCCATCGCTGCTGCCGAAAAGCTCTCGAAGACTCACGACAAGCAACACCTGCCCCAGCCCATGGGCGAGCACATCAAGGGCAGCCCGAACTCCGACCGTGTTCTCAGGCCCATGTGTTTTGTGAAGCAGTTGGAGATTCCTCCGCATGGCAGCTACAGGCCCAGCCTCGTCCCCGCCACGCCACGCGCTAATTTGGCCAAGGAGCTGGAGAAGTACTCCAAGGTGTCCTTCGATTATGCAAGCTTCGACGTGCAGGTGTTCGGCAAGCGCATGCTCGCCCCAAAGATGCACACCAGCGAAACTTCACCCAAAGCCTTCAAATCCAAACCTCCATTCCCCAGGGCCTCTCCCCCAAGTCCCAGCTTGCACGGTGGTTATGGAAAAAGCTCCTCCAGTGGCTATGATTATTCCCATGATGCCGAAGCTGCCCACATGGCCGCCACTGCGATCCTCAACCTGTCCACGCGCTGCTGGGAGAGACCAGAGAACCTCAGCATCAGACAACAAGATAAGAGCATGGAAATTGAGGTGGATGAAAATGGCACCTTGGACTTAAGCATGAAGAAGCCCATAAAGAGAGAAGCGGGCATGTCTTGCGCCAGCCCTGAAGTGCGTTCCCCTGATCtgtcttcatcatcttcatcatcatccacATCTCttcaccatggcaacagcagCATCTCGCCCCACTCTTTACACACCTACAAACAAGAGGAGTGGGAGGGGCCTCTGGACTACACCAAACCCAATCGGCAGAGAGAAGAGGAGCTAGAAGAGATGGACCACAGCGCTCAGTCATTTGCCTCTTCCGACCCTGAGGATTGCGACATGATGCAGGACAGCCTTGAGGACAGGAAGTACCCAGGAGAGGTCACAACTCCAAGCTTTAAGGTCAGGTTCCAGCCCAAGGACAGCAAGAAAGAACTCCTACTGTGTCCCACTCCGGGATGTGACGGCAGCGGACACATCACCGGAAACTATGCATCGCATCGCAGCCTGTCTGGGTGTCCTCTCGCTGATAAGAGTCTTCGGTCCCTCATGGCAGCACACACAGCCGAACTCAAATGTCCAACTCCAGGATGTGATGGTTCAGGCCATATCACTGGTAACTACGCGTCTCACAGAAGTTTGTCTGGGTGTCCACGGGCCAAGAAAGGTGGAATAAAAACAACTCCCATCAAGGACGACAAGGAGGACTCCGAGCTCTTAAAaTGCCCAGTCCCGGGCTGTGACAGCTTGGGTCACATCAGTGGGAAGTACGCCACTCACCGCAGTGCATATGGATGCCCGTTGGCGGCCAGGCGGCAGAAGGAGGGTTTGCTGAACGGGTCTCCTTTTTCTTGGAAGGCGTTTAAGACAGAAGGCCCAACCTGTCCCACACCAGGATGTGACGGATCGGGACACGCCAACGGCAGCTTCCTCACCCACCGCAGCCTCTCAGGCTGCCCCAGAGCCTCCCTCAACAAGAAGAAAGCCAAGTTCCCTGGAGAAGAGTATCTCAGCACTAAGTTCAGAGCCAGTGACGttTTAGACAATGATGAAGACATCAAGCAACTGAATAAAGAAATCAACGAGCTCAATGAATCCAACAATGAGATGGAGGCAGATATGGTCAACCTTCAAACACAGaTTACATCCATGGAGAAGAACCTGAAGAACATCGAGCAGGAGAATAAGATGATTGAAGAACAGAATGAGGCATTGTTTATGGAGCTGTCTGGACTCAGTCAAGCTCTTATACGGAGTTTGGCCAACATCCGTCTGCCTCACATGCAGGAGCCAATCACAGAGCAGAATTTTGAGAGCTACGTGAGCACCCTGACCGACATGTACACCAATAAGGACTGCTACCAGAATCCAGAGAACAAGGCCCTTCTGGAGACCATCAACAAGGCAGTGAAAGGCATTAAGGTCTGACTAAGCCAAAAGACGAGGATGAGAAGCAAAAGCGTggaaaagaaatagaaatgtgGAGCCATTGGGAAGAGCATACAAATGACATACAAAAAGGGCATTCAGGTTTTTTTGAACAACAATCTAAACCTTCATCCCAGGGAGCATTCTGTGAGTTCAAAAAGaggtatataatatatattactatgaGGACCAAAATCCACAAAAGCTGCTGGATTGGAAGGCGAAGATGGAACCAAATCCTTTATTTACGATGGAAAGGAGAGACACAAACATAGTTTTCtttacagtttttgttgttttacattCAAGCGGTGGGAAGTCTCGGAAGAAGAGGAAGCTGGGAGTAGAACTTCCAGAAGATGTGCAGCCCAGGCTTTAGGTGAAAGAGTCTTTTACTCATTCGTGAGGATGCTGCTcctctgaaaacaacaaaagtgaCGCTCCAAATACAAGTGATGCCTACGTGAGCCACAGCAGAACAGACATATGCAGTGCTTGCTCGTCTTTCCTTCTTTACCAGAAGAAAACCGAAGTGGTTTTGGGTCGTGGGGGAAATGAGAGAATGTTGTACTAGCATACAAAGCGAGCGAATTGCGTGTGCAACCTTATCAGTGCCATGCGGTTGACTCTGTAAATTTCACCTGTTGAAACACTGCTTTGTCTCGGcagccattttttttgtttgttttttggtttggtttgttttagaGCTACAGGAAGGAGCGTTAGCTTGCTCTCATTTATTTGTAGTACTTACACTGTAGGAATATTTACCCAGCGTAGTCATATCTCTTACATATGAACAATGAGTTGCACTTCATTTCAGTCCTTTCAACATCAGACAAGATGTTGGATTGTCACTGATCTATAAATTATACTAAACTTGTCCAGACactactgtaatttatttatattttgttataatttaatcttaactgtattatttatttgaattcaccTATTTAAATATTCACAGCCCTTCTGTTTATAACAAGTCATGAAAATGTGACAAGGAACTTGCCACATCAACAtttggaaagagaaaaagaaatgtacCACTAATTTTTATAACTTCTTTTAATTTGACAATagagtttttaaacattttttaagtgcaaatatttttaaccaacaatgttttgataattttgtacattttctttctctctacctgtatatctatctctatcttactctatttgcatttttttttctcgaatTTCCAACACAGCTGAAGGAGAAGTATCAtctctatttattatttatttaatatttatgatgaaATTATGAACTGTGATACGgttgtaatgtatatttattttgtaacgtCTCGGTGTGTTTGTGAAGTCATAGTAGTCTTGAAGAAACTTTGgcgatatataaaaaaaaaaaaaaaaaaataaagacaaaaaacatgttttggactacagaataaaacatgatgATTACCGAGGGTTTTCCTTATACCAGCATTACTTCCTATAGGAatgtaaagaggaaaaaagcaaTTCCAGTACTGTGGAACCTACAGCTTTGACTCTTACCCCGTCCGTCTCGACCCGGAAGAAGACGTTCCTCTGGAtcctcttgtgttttttttttttcttttcgttttttttcttcttctttgtacCTCCTCAAACTCTCAGTTGTGGCCAAAAACTGTTCCCCTTGAACAATCCCAATGAATGGCAAATggattatttttgctttcttgcTAAACTTGTCTTTGTCGGACCATGGGAAGCGGGCGGTTGTTTTTGAGGTGGGGCACGGAAGACGAATACCAACCATCCTGACGGAAACTCTTGAACCACAATGTCCTTACTCGACTAGTATCAGACAAGCATACACCCGTGTAGCCTTATactagatttttatttcttcgATGCACAAAGTGCCACTGACCTGTGCTTTCGTTACCGACTCCGCCCATTCAGCAACCACACTACCCTCGGGTCATGTGACCGTGGCATAAGTGGGGATTGTTACAGATGCCTTTATTCCTTTGCCGTGATGGCCATACCTACACAATATATTCattctgtatttaaaagaaaaaaaaaaagaagacaaaaaaactatatatagtatataaacatacatatatttttacagtgtaattgtTAACTCTTTTTCTCTTATAATAGCTAAACAGAAACAATATCTTTCCAAAAGCTGTGAGTACTACTATCCATAGAagactaaataatatataaaaaaaaaaaaaaacacagacccAGTTTACTGTGGTTCCGGGATACgatgtgttttataatatgtaaacGTACATTTCTAAAGCGAAGAATACGAGGATGTTTGTAGAGTTTCCTATTTTCTGGTCCAAGCTCGCTGGGCCTCTGTATGTAAGCCAGCCGCATTAATGGGACAATGGTTAACAGATTAGTCTTAGACCGTAATCGTTTAGACGCATTGTACTGTGCTGAAAGTTCTCCTCGGTGGATCTGTCTTTAATATTGTACGGTGTTGTGCAGTTCTGGTGGGACACGCCACACTTAGATACGTGTGTAAAATGCCAATCATCGCAATGACATGTGTATGACTCATAATAGCGAGTTGTGAAATGAACATTGTGCCTCTATTCAGCCGGTCGTTTCGTTAAATAGTACACAGCGGTCATGTTGTTCATTTGCTATTACGCCAGCAATATTGTGATGGACAGAACATGTGTGCACTTTTCAAAAATCTTGAATGCCAACTAATGACCTTTCAACCAAAAGGTTTTTCTTTACGCGAGCGAgagaggttgtgtgtgtgtgtgtgtgtgttagcagaTTATTTTtcgtttggaaaaaaaaaaaaaaaaaaaaaaaaaaaggtacaaatggCTAACGGACAACTGTTCATTGCACCGACAGAATTGGGATCAAATATCGCAAATGTCTTTGacttgtttgttgttgtttaatgtgAACCTGTATCCTGTCTGAAATGTCAAATGCCCTTTGACCGACATGTTCTTGCCTTGtcgccaacacacacacaaaaaaaagcccaaaacgGGATGTGCGGTATCAGATCTGTTAGCGCTCGGCAGCAAGCCTTTCGttaaaacgacaaaaaaaaaaagatgtggtTTGAGCTTTGAGATTGTCATTGGCGTGCCCTCCTCGCACGCGGAGAAAACGAAGGAGACGCTAGTTGCATAAAtctttgtccatttttttttccacagaatgTCAGATTGGCCTCGTTCGCCTCGTTCTGTGTAACCTTTCCGCGGGAAAGATGTGTGCGTTGCATTTCAATACCACGCCGTTTCCTTTGCTTTAAGAGCGATCTGAAGACGTTGCAACGGCAGACTTTTCATTAGAGTTCTCCCTTCTATTAAATACTCGCTACAGATGTCACATCGTCTTATTACGATGGGAGAAACGTTTCTATCTGCTTACTACTACTGACGTGAGATAGCCTAAAGCATGCGTGAATTACGTTTCCTCGATGCATGCTTCTTAAACGCCCGCTGTCGGTGATGATGAGCGGCTACGGATGTTGCGCGGCGAGGTCGAGTGTGTTGAATCTGCCTAATAATGTAGCATGTTCTCTGGAGCAGTGTAGCATCTGCAAATGCAAGTCAGCATATGTAACCCCCTCCCGTGGAACCAAACGCGGCTTGATTTAGCACCTTGTACTCGAGAGTCCGGGCCTTTCCGAGACTCGTGCCAACTTTAGGGCAATTAAAACGGTTCCTCTGTCATTTCACGAGCTAAAAAAAGTCGGAAGGTACTGTTTGTCCCATTAAGCTGATAGAACCAAAACGGCCCTCCTTCTGTAGGTACTGTAGCTTACAGCTCTGTGGTTTTCTCATGTGTGCCTTTTCTCGCTTCTGTTCGCTGCAGGAAAGGGTGTGTTTACATTTAAGGactgggttcaaatcccactcaGGACGCCAgctttttctcctctttttctttccttccttgTTTTGAGGGGGAGGTTGGGAGAGGTAATGGGAATTCAGCAAAGTGGCGAACACCAAGAGCGAATCGCATTGAAATCGATAGTCAGCTTATTGTTCGACatgaaataaatcacaatacGTAACACTATTCTTCCCAAAACTGTGATTCTGATTCAGGTATGAAATTGTGCGCTGGGTCATTTCATCGAGTCAAATAATCATGGAACGTATCACAGATGAAGCATTTATGCACAGGGCATTATTCTGACAACAATGGGATTCTGTACATTTGTAATAAAGGACAGTGTTGTTGTATTGAAGAATATTTCCAAGTAAAcgccagaagaaaaaaaaaaacaactgtattttaacCCACGGCCAAGGCTTGTCCTCTTGCGTCCTTTTTACAGAGATCAGCTATTTTTACTGGTGATTTTATAGCCACAAAATGATTCTCCtttagaaaaagacaaaaaaagagacggTACTTCcaagaacaataataataagcactTTCACAGTGATAGACTACATGTTTTAGTCACTTTTGTAGCAGTTGTAGGTTCCTTACCGAGGTTTTGTTTCTGTAGTGCAGGACAAGCTATGGCTGTGCGTGATTCGAGGTAACTTTGGAAATGAAGTGTGTAGTTGGTTTTGGATTGTGACCGTGTTTGTGTATCCTTGTACCTGTGCTCATTGATATCAGTGTTAAAAGAGAACAATAATGTCTGTTTTGTGGAGGTATCGTTAATTTCAGTGTTATATatggaaaacataaataaagagTCAATAATGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230441 lncRNA upstream 330581 7400990 ~ 7401189 (+) True G155619
TU230289 lncRNA upstream 892609 6836963 ~ 6839161 (+) True G155509
TU230292 lncRNA upstream 893026 6836963 ~ 6838744 (+) False G155509
TU230227 lncRNA upstream 909720 6797111 ~ 6822050 (+) True G155457
XR_006247834.1 lncRNA upstream 1003560 6725037 ~ 6728210 (+) True LOC122328804
XR_006247860.1 lncRNA downstream 101728 7866780 ~ 7868674 (+) True LOC122328944
XR_006247861.1 lncRNA downstream 101728 7866780 ~ 7868674 (+) False LOC122328944
TU230505 lncRNA downstream 155151 7920203 ~ 7921525 (+) True G155651
TU230496 lncRNA downstream 156970 7922022 ~ 7923577 (+) True G155645
TU230509 lncRNA downstream 164681 7929733 ~ 7932056 (+) True G155655
XM_043224105.1 mRNA upstream 244234 7459498 ~ 7487536 (+) True oprl1
XM_043223976.1 mRNA upstream 426236 7298360 ~ 7305534 (+) True tcea2
XM_043224348.1 mRNA upstream 958784 6730816 ~ 6772986 (+) True soga1
XM_043224765.1 mRNA upstream 1023103 6640878 ~ 6708667 (+) True lama5
XM_043224443.1 mRNA downstream 1171 7766223 ~ 7773972 (+) True LOC122328639
XM_043224444.1 mRNA downstream 1175 7766227 ~ 7773972 (+) False LOC122328639
XM_043224568.1 mRNA downstream 50039 7815091 ~ 7821793 (+) True LOC122328711
XM_043224569.1 mRNA downstream 50046 7815098 ~ 7821793 (+) False LOC122328711
XM_043225458.1 mRNA downstream 119244 7884296 ~ 7920041 (+) True plagl2
TU230347 other upstream 427412 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 492851 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 1137035 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU229052 other upstream 4035132 3694652 ~ 3696638 (+) False ube2t
TU230667 other downstream 566689 8331741 ~ 8333376 (+) False LOC122328506
TU230751 other downstream 723034 8488086 ~ 8488641 (+) True G155799
TU230843 other downstream 1261456 9026508 ~ 9033098 (+) True lzic
TU230931 other downstream 1355832 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 1355832 9120884 ~ 9122393 (+) True G155927

Expression Profile