RNA id: TU265411


Basic Information

Item Value
RNA id TU265411
length 531
lncRNA type sense_over
GC content 0.41
exon number 2
gene id G178908
representative True

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 42797 ~ 91317 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TTgtggttttgatgaaacatgctgTCCAGAAACTCTGTCTTCTGCTCTACAATCCTCAAACCATCTGACAGAgatggacctgagtaacaatgatctgcaggattcaggaggaagctgctttctgatggactgaagagttcaCACTGTAGACTGAAGATACTGAGGTTGTCTATCTGTAGGGTGACAGATGAAGGCTGTGGTTATCTGGCTTCAGCTCTGCGCTCAAACCCCTCTGCtttgagagagctggatctgagctacaacaGCCTTGGAGAATCAGAAGTCAAGATGTTCTCTGATCTACAGAATGACCTTAACTGCGCACTGACCAAACTGGATATTTCAGTTTAACTTTCTTGTcagttgcatttgttaatcACATAAGCATACGTGgcttataattttattttccataggtttcatttataacatacattgttgctgatttggagtgcacacaaattagtTGCTTTGTATCTGTTATTTACCTTTGTTTCTATATTGAGTTAGGTTTACCGGCAGTGTGTGGCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006248612.1 lncRNA upstream 1921 20681 ~ 40876 (+) True LOC122333283
TU265409 lncRNA upstream 1932 35824 ~ 40865 (+) False LOC122333283
TU265408 lncRNA upstream 1932 36537 ~ 40865 (+) False LOC122333283
TU265407 lncRNA upstream 7039 20680 ~ 35758 (+) False LOC122333283
TU265451 lncRNA downstream 51885 143202 ~ 143941 (+) True G178938
TU265463 lncRNA downstream 76826 168143 ~ 168360 (+) True G178946
TU265464 lncRNA downstream 78485 169802 ~ 171562 (+) True G178947
TU265465 lncRNA downstream 82023 173340 ~ 173646 (+) True G178948
TU265477 lncRNA downstream 102965 194282 ~ 194540 (+) True G178956
XM_043230825.1 mRNA downstream 16375 107692 ~ 120424 (+) True txnrd3
XM_043230830.1 mRNA downstream 31616 122933 ~ 127552 (+) True ntan1
XM_043230824.1 mRNA downstream 37066 128383 ~ 134035 (+) False orc4
XM_043230823.1 mRNA downstream 37067 128384 ~ 134035 (+) True orc4
XM_043230831.1 mRNA downstream 93267 184584 ~ 187502 (+) True LOC122333286

Expression Profile