RNA id: XM_043230830.1


Basic Information

Item Value
RNA id XM_043230830.1
length 1405
RNA type mRNA
GC content 0.53
exon number 10
gene id ntan1
representative True

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 122933 ~ 127552 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TGACGTCCGCGCAAAGCGGAAGAGAACGCGGCGGTGCGACGGGGGAGAGTCACACATGACAAGAGTTATTAATGATCAGAGTTTTCATGAAACGATCAGATGAACGGGTTTAATCTCTGCCAGGATGCCGCTGTTGACGCAGAATAAGCGAATAGAGCGCGTGAGCTCGACCGCGGAACTCTTCAGCAAATACCCGAATTTGAAGGAAAGTGCGAAGCAGTTTGTGTCCAGAAGTCCAGAGGCCGTGGACACTAAACAGCTCCTGTACGTCCAGCAGCGGGAGTTTGTGGCGACCACACCAGCGGACAATTCGGTCTCAGTCCTGGGATCCGACGACGCCACAACATGCCATTTAGTGGTGCTTCGACACACAGGCAGCGGGGCGACGTGTCTGGCACACTGCGACGGCTCCAGCACGTGGACCGAGGTTCCTCTCGTAGTCAGCGCCGTCACTTCTAGAAGCAACCCAGCCAAAGAGGGCAGACTGGAGCTGCACCTGGTCGGTGGATTCGATGACGACCGGAGGACCTCGCACTCACTCAGCCTTAGTATTCTGGCTGCCTTTCAAAAGCAGAAGGAGGAGATTCACCTGGAGACGTGCTGCATCACAGACATGAATGACGTCATCAAAGATGGGATTCATCGGCCCGTGGTGTATGGGATAGGTGTAGACGTTAAAACGGGTGACGTGTTTCCGGCGTCATTCACGTGTCGAGGACCGGCGGAGGAGCTCCGATCCGCTCGCACCTTCTCTGGTGGACAGATGGTTGAAGTGTATGACTCTAGCAGAGAGCTCGTGAAAATCGGTCCATGCAGATGGACGCCAAACAACGACATGGCCTTCTGGCTCTCCCAAGACGACGAAACCATCCTGCAGTTTTTGTCCACGTCTCCGTACGCAGAGCCCCCTCACTTCGTCCGTCACATCAAGTCCACCATCCAGTTTCTGCTGGATCATCCGACCGCAGACGGGCTGTTCCCGGGCGGTCAGCCGCATCTGTACCGCCGCGCCGAGGACGGGCGCTGGAAGAGAGCCTGAACCCGACCTCCGACCTCCGTGACCCCGCTGTAACCCAACTAAAGGCCTTCGACGTCTGATGTTTAAAGCAGGAGCTCCTTGACAGCGATCTGAACTGACCGAAGCTCGGATCGAAATATCTGATGTTTCTAACTGCACCTGCCGGCCCTTACGTACAAAgacgttttcttttcttttttttgtttgatattcGTTGTGTACGTCAATGCGTCGTATGTCGTGTCCTCTACTTTAAACTAACATGTGATGTTGTTGTCTTTTTAACATCTAGCTTTATTTAAATCGCTCGTTAATTTTGGAAGCTGTAAATAATGCTGTGATCCTTTGAGGAGGAATAAGAGAATTAAAATCACGTTGCCAGTGGAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008418 protein-N-terminal asparagine amidohydrolase activity molecular_function

KEGG:

id description
K14662 NTAN1; protein N-terminal asparagine amidohydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265411 lncRNA upstream 31616 42797 ~ 91317 (+) True G178908
XR_006248610.1 lncRNA upstream 78115 42549 ~ 44818 (+) True LOC122333275
XR_006248612.1 lncRNA upstream 82057 20681 ~ 40876 (+) True LOC122333283
TU265451 lncRNA downstream 15650 143202 ~ 143941 (+) True G178938
TU265463 lncRNA downstream 40591 168143 ~ 168360 (+) True G178946
TU265464 lncRNA downstream 42250 169802 ~ 171562 (+) True G178947
TU265465 lncRNA downstream 45788 173340 ~ 173646 (+) True G178948
TU265477 lncRNA downstream 66730 194282 ~ 194540 (+) True G178956
XM_043230825.1 mRNA upstream 2509 107692 ~ 120424 (+) True txnrd3
XM_043230833.1 mRNA upstream 31611 84959 ~ 91322 (+) False LOC122333289
XM_043230824.1 mRNA downstream 831 128383 ~ 134035 (+) False orc4
XM_043230823.1 mRNA downstream 832 128384 ~ 134035 (+) True orc4
XM_043230831.1 mRNA downstream 57032 184584 ~ 187502 (+) True LOC122333286
XM_043230832.1 mRNA downstream 57032 184584 ~ 187502 (+) False LOC122333286

Expression Profile