RNA id: TU265463


Basic Information

Item Value
RNA id TU265463
length 218
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G178946
representative True

Chromosome Information

Item Value
chromosome id NW_025047901.1
NCBI id JAEQBD010000246.1
chromosome length 542128
location 168143 ~ 168360 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGACTGAAGTCATCAGACTAATGATTTTACATTAAAGGAGGGAAACAAGCCATACATACTGTAGAGAGCAGATTATTAGAGAGGAGGAGACTCTCTTCACTACAGAAAACTGCCTAGTAACAGCACGGCAACAGCACAAAAACTCCCCGGCACCCAAAatctgcatagcaacaccatgGCAACCACACAACAACATAGGACTTTGGATTTTAAAGTAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU265451 lncRNA upstream 24202 143202 ~ 143941 (+) True G178938
TU265411 lncRNA upstream 76826 42797 ~ 91317 (+) True G178908
XR_006248610.1 lncRNA upstream 123325 42549 ~ 44818 (+) True LOC122333275
XR_006248612.1 lncRNA upstream 127267 20681 ~ 40876 (+) True LOC122333283
TU265464 lncRNA downstream 1442 169802 ~ 171562 (+) True G178947
TU265465 lncRNA downstream 4980 173340 ~ 173646 (+) True G178948
TU265477 lncRNA downstream 25922 194282 ~ 194540 (+) True G178956
TU265478 lncRNA downstream 44082 212442 ~ 212848 (+) True G178957
TU265505 lncRNA downstream 188268 356628 ~ 420130 (+) True G178978
XM_043230824.1 mRNA upstream 34108 128383 ~ 134035 (+) False orc4
XM_043230823.1 mRNA upstream 34108 128384 ~ 134035 (+) True orc4
XM_043230830.1 mRNA upstream 40591 122933 ~ 127552 (+) True ntan1
XM_043230825.1 mRNA upstream 47719 107692 ~ 120424 (+) True txnrd3
XM_043230834.1 mRNA upstream 78031 84959 ~ 90112 (+) True LOC122333289
XM_043230831.1 mRNA downstream 16224 184584 ~ 187502 (+) True LOC122333286
XM_043230832.1 mRNA downstream 16224 184584 ~ 187502 (+) False LOC122333286

Expression Profile