RNA id: XM_022673440.1


Basic Information

Item Value
RNA id XM_022673440.1
length 1976
RNA type mRNA
GC content 0.45
exon number 15
gene id kynu
representative False

Chromosome Information

Item Value
chromosome id NC_035906.1
NCBI id CM008309.1
chromosome length 35377769
location 7706002 ~ 7735457 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence

GACTTCTCTGTGTGTAAAAGATTAGGAgctactttactttactgtgtgaaaatgttctTCATTTGTTCTTGTTTCCCGTTTACAAGATATTATCAGCTGACAGAGCTTCTCCAAGTACTGCACTCGAGGCATGTTCAGTGAGATCCCAAATCCAGCACGATCCTGACTGAGAATACGTTTCAGCACTTCAATAAGTTGAACTAAAACTTAGTCATGGACCTTCTGGATGCTGGTTCTCCACGAGAAGTCATTGAGAAGGTGGCTAAGCACCTAGACTGCAGCCCCACGTCTCGGGAAGTTGCTGAATATTTTGACAAGAATGACAAGCTGAGACATTTACGACAGGAGTTCCTGTTTCCTAAAGTCGCTCAGCTTCCCACATCTGACCTGTCGCTTGTGGGTGGATCAGAAGATTGCATTTACTTTGTGGGGAACTCTCTTGGCTTACAGcccaaaaatgtgaaaaagtatatTGACGAGGAGTTGAAGAAATGGGCCACAATTGGGGCCCATGGTCACGTGATGGGGTCACGTCCTTGGGCCTGGGCTGAGAATGATCTGGAGGATCTCATGGCAAAGGTTGTGGgtgCTAAACCAGAAGAAGTTGCCTTGATGAATGGTTTGACAGTCAATCTGCACCTTCTACTGCTTGCTTTTTACCAGCCCATCGCAACACGCCACAAAATACTTCTGGAGGACAAAGCCTTTCCATCTGACCACtaTGCCGTGGAATCTCAGATACGGCTACGGGGATTTGATCCAAGCACAAGCATGCTCTTCGTTAAACCCAGACCGGGGGAGGACACTTTGAGGACAGAAGACATTGTGTCTACAATAGAGCGTGAGGGACACTCCATTGCTGTGGTGATGCTGAGTGGAGTCCAGTACTACACTGGGCAGCTGTTCAATATGGAGGTCATCACCAAAGCAGGCCAGAACCAGggCTGTTATGTGGGTTTTGATTGTGCACATGCAGTGGGTAATGCTGACCTGCGACTGCATGACTGGGGTGTAGACTTCGCCTGCTGGTGCACATATAAGTATGTGAATTCTGGAGCTGGGGGCTTGGCTGGAGCGTTTATACATGAGAAGCATGTGGACAGAGTCAAACCTGCgCTGCTCGGATGGTGGGGGCACAACCTGAAGACGAGATTCCAGATGACCAATGAGATGGATCTGCAGCCTGGAGTGAATGGATACAGACTCTCTAATCAACCTGTTCTTCTAGTGTGCCCTCTACAGGCCAGTCTAGAGATCTTTAATCAGACCACCATGAAGGATCTGAGGAAGAAGTCTATACTGTTGACTGGCTATCTGGAATACCTCCTCAAGCACTACTACAGTAAGAAGGCATCGGACCCCCATAAGCCCTGTGTTCACATCATCACACCCAGCAACCCAGCAGAGAGAGGATGCCAGCTgtccctgtctttctctctacccATCCGAGCTGTCTTTAAAGAGCTGGAGAAGAGAGGAGTAGCTTGTGATATGAGGGAGCCCAACGTTCTGCGTGTAGCTCCTGTTCCACTCTACAACTCCTTCTCTGATGTCCATCGCTTCATCACTGTCCTGGGATCAGCGCTGGCTGCCAGCAACAAAGACTGACATCTATAGAGCATTGATTAACCCTTTGAGGCACGGTGGtgactgtgtttttgtttttcagtttcttACTTTGCAGTTGTGGTTAAAGTgaaatctttacattttcaaaaataattGATCTTTTCTGGCAACACTTGTAATGTATCACACAGAAAGTGATGTACAATCTGTAAGAtatgcaacaacaaaaaaatcacaccCTAAAATCAGCTTTGTAAGTCATATATCAGTAAATCAATAGGTATTTTGAAACAAATTTTCCGTTTGTGCCTcaaagggttaaaggaaaatgaaaaagccatactaaaaatgaaaaggaaaagaTTAATAGGAAAAtgatgaaataaacaaaattgtgaaaattaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU119604 lncRNA downstream 63224 7598802 ~ 7642778 (-) True G88923
TU119500 lncRNA downstream 290517 7415058 ~ 7415485 (-) True G88833
TU119491 lncRNA downstream 323905 7325465 ~ 7382097 (-) True G88824
TU119423 lncRNA downstream 491585 7209748 ~ 7214417 (-) False LOC103026131
TU119434 lncRNA downstream 528388 7175374 ~ 7177614 (-) False G88781
TU119749 lncRNA upstream 343974 8069404 ~ 8069620 (-) True G89035
TU119743 lncRNA upstream 350454 8075884 ~ 8079057 (-) True G89029
TU119750 lncRNA upstream 353634 8079064 ~ 8079780 (-) True G89036
TU119753 lncRNA upstream 355943 8081373 ~ 8081590 (-) True G89038
TU119798 lncRNA upstream 516920 8242350 ~ 8243320 (-) True G89067
XM_022673434.1 mRNA downstream 7990 7643056 ~ 7698012 (-) True LOC103025511
XM_007233387.3 mRNA downstream 69694 7557482 ~ 7636308 (-) True reck
XM_007233444.3 mRNA downstream 155621 7535978 ~ 7550381 (-) True LOC103025816
XM_007233388.3 mRNA downstream 191414 7429999 ~ 7514588 (-) True LOC103034175
XM_007233389.3 mRNA downstream 307419 7336728 ~ 7398583 (-) True lancl2
XM_022673446.1 mRNA upstream 21444 7746874 ~ 7760984 (-) False boll
XM_022673444.1 mRNA upstream 21444 7746874 ~ 7760984 (-) True boll
XM_022673452.1 mRNA upstream 136005 7861435 ~ 7873399 (-) False iqcb1
XM_022673450.1 mRNA upstream 136005 7861435 ~ 7873399 (-) True iqcb1
XM_022673453.1 mRNA upstream 149496 7874926 ~ 7885865 (-) False ccdc14
TU119448 other downstream 463432 7241711 ~ 7242570 (-) True G88789
TU119427 other downstream 587876 7117661 ~ 7118126 (-) True G88779
TU119041 other downstream 3110677 4595058 ~ 4595325 (-) True G88465
TU119034 other downstream 3139798 4565850 ~ 4566204 (-) True G88458
TU118917 other downstream 4014538 3606470 ~ 3691464 (-) False lyrm4
TU120441 other upstream 2077341 9802771 ~ 9854074 (-) False LOC103029706
TU120626 other upstream 2169395 9894825 ~ 9901700 (-) True G89690
TU120653 other upstream 2235852 9961282 ~ 9964606 (-) True G89708
TU120687 other upstream 2314127 10039557 ~ 10042853 (-) False LOC103025178
TU120738 other upstream 2498090 10223520 ~ 10224663 (-) True G89751

Expression Profile