Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_001518682.2 |
| length | 838 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 5 |
| gene id | LOC103022254 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035906.1 |
| NCBI id | CM008309.1 |
| chromosome length | 35377769 |
| location | 10227943 ~ 10289605 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0000003 | reproduction | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU120564 | lncRNA | upstream | 47524 | 10106125 ~ 10180419 (+) | True | G89636 |
| TU120543 | lncRNA | upstream | 133439 | 10089884 ~ 10094504 (+) | True | G89624 |
| TU120544 | lncRNA | upstream | 133439 | 10089884 ~ 10094504 (+) | False | G89624 |
| TU120546 | lncRNA | upstream | 133439 | 10089884 ~ 10094504 (+) | False | G89624 |
| TU120537 | lncRNA | upstream | 215520 | 10012150 ~ 10012423 (+) | True | G89619 |
| TU120547 | lncRNA | downstream | 162964 | 10452569 ~ 10453879 (+) | False | G89624 |
| TU120814 | lncRNA | downstream | 375785 | 10665390 ~ 10666011 (+) | True | G89802 |
| TU120812 | lncRNA | downstream | 383114 | 10672719 ~ 10674178 (+) | True | G89801 |
| TU120817 | lncRNA | downstream | 394393 | 10683998 ~ 10685064 (+) | True | G89804 |
| TU120821 | lncRNA | downstream | 401756 | 10691361 ~ 10691561 (+) | True | G89808 |
| XM_007249781.3 | mRNA | upstream | 15262 | 10206563 ~ 10212681 (+) | True | LOC103023172 |
| XM_022673502.1 | mRNA | upstream | 122827 | 10101550 ~ 10105116 (+) | True | LOC111193325 |
| XM_022673501.1 | mRNA | upstream | 156464 | 10026180 ~ 10071479 (+) | True | LOC103039700 |
| XM_022673508.1 | mRNA | upstream | 216151 | 10000994 ~ 10011792 (+) | False | LOC103025907 |
| XM_015605932.2 | mRNA | downstream | 327917 | 10617522 ~ 10632206 (+) | True | LOC103038777 |
| XM_007249777.3 | mRNA | downstream | 346329 | 10635934 ~ 10654955 (+) | True | tnfaip8l2 |
| XM_007249776.3 | mRNA | downstream | 370070 | 10659675 ~ 10663950 (+) | True | scnm1 |
| XM_022673516.1 | mRNA | downstream | 455746 | 10745351 ~ 10752631 (+) | True | hormad1 |
| XM_022673514.1 | mRNA | downstream | 455887 | 10745492 ~ 10752631 (+) | False | hormad1 |
| TU120304 | other | upstream | 617689 | 9602771 ~ 9610254 (+) | True | G89453 |
| TU119784 | other | upstream | 1978509 | 8246214 ~ 8249434 (+) | False | sumo1 |
| TU119517 | other | upstream | 2647983 | 7578610 ~ 7579960 (+) | True | G88849 |
| trnap-agg_3 | other | upstream | 2984966 | 7242906 ~ 7242977 (+) | True | trnap-agg_3 |
| TU119113 | other | upstream | 5104217 | 4911656 ~ 5123726 (+) | False | pard3 |
| TU120818 | other | downstream | 396052 | 10685657 ~ 10686056 (+) | True | G89805 |
| TU120819 | other | downstream | 398661 | 10688266 ~ 10688820 (+) | True | G89806 |
| TU120940 | other | downstream | 615039 | 10904644 ~ 10907172 (+) | False | LOC111193328 |
| TU121370 | other | downstream | 1845969 | 12135574 ~ 12138638 (+) | False | LOC103025787 |
| TU121367 | other | downstream | 1865292 | 12154897 ~ 12156862 (+) | True | G90199 |
