Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_007256426.2 |
| length | 1308 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | LOC103043660 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035918.1 |
| NCBI id | CM008321.1 |
| chromosome length | 32506130 |
| location | 12245469 ~ 12250437 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0034314 | Arp2/3 complex-mediated actin nucleation | biological_process |
| GO:0005885 | Arp2/3 protein complex | cellular_component |
| id | description |
|---|---|
| K05755 | ARPC4; actin related protein 2/3 complex, subunit 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU256262 | lncRNA | upstream | 5231 | 12237830 ~ 12240238 (+) | True | G189074 |
| TU256256 | lncRNA | upstream | 9377 | 12230787 ~ 12236092 (+) | True | G189073 |
| TU256260 | lncRNA | upstream | 12033 | 12230787 ~ 12233436 (+) | False | G189073 |
| TU256253 | lncRNA | upstream | 39486 | 12201419 ~ 12205983 (+) | True | G189071 |
| TU256194 | lncRNA | upstream | 201051 | 12044143 ~ 12044418 (+) | True | G189025 |
| TU256245 | lncRNA | downstream | 6046 | 12256483 ~ 12259037 (+) | True | G189066 |
| TU256318 | lncRNA | downstream | 77177 | 12327614 ~ 12328459 (+) | False | G189104 |
| TU256316 | lncRNA | downstream | 77322 | 12327759 ~ 12328459 (+) | True | G189104 |
| TU256311 | lncRNA | downstream | 85098 | 12335535 ~ 12345772 (+) | True | G189101 |
| TU256312 | lncRNA | downstream | 85098 | 12335535 ~ 12345772 (+) | False | G189101 |
| XM_007256424.3 | mRNA | upstream | 18989 | 12210745 ~ 12226480 (+) | True | LOC103043048 |
| XM_015607644.2 | mRNA | upstream | 18989 | 12219996 ~ 12226480 (+) | False | LOC103043048 |
| XM_022682375.1 | mRNA | upstream | 244806 | 11690872 ~ 12000663 (+) | True | fam19a1 |
| XM_022682377.1 | mRNA | upstream | 244806 | 11690872 ~ 12000663 (+) | False | fam19a1 |
| XM_022682376.1 | mRNA | upstream | 254119 | 11690872 ~ 11991350 (+) | False | fam19a1 |
| XM_022682385.1 | mRNA | downstream | 238325 | 12488762 ~ 12504292 (+) | True | LOC103039330 |
| XM_015607192.2 | mRNA | downstream | 278602 | 12529039 ~ 12546452 (+) | False | usp48 |
| XM_007254538.3 | mRNA | downstream | 278684 | 12529121 ~ 12546452 (+) | True | usp48 |
| XM_022682386.1 | mRNA | downstream | 278958 | 12529395 ~ 12546452 (+) | False | usp48 |
| XM_007254539.3 | mRNA | downstream | 279256 | 12529693 ~ 12546452 (+) | False | usp48 |
| TU256257 | other | upstream | 9377 | 12233201 ~ 12236092 (+) | False | G189073 |
| TU256169 | other | upstream | 244816 | 11690886 ~ 12000653 (+) | False | fam19a1 |
| XR_002651606.1 | other | upstream | 438374 | 11806708 ~ 11807095 (+) | True | LOC111195378 |
| TU256132 | other | upstream | 780989 | 11451379 ~ 11464480 (+) | True | G188968 |
| TU256068 | other | upstream | 1155422 | 11089728 ~ 11090047 (+) | True | G188923 |
| TU256360 | other | downstream | 189166 | 12439603 ~ 12440733 (+) | True | G189141 |
| XR_002651607.1 | other | downstream | 280110 | 12530547 ~ 12545101 (+) | False | usp48 |
| TU256538 | other | downstream | 745235 | 12995672 ~ 12996904 (+) | True | G189268 |
| XR_002651609.1 | other | downstream | 1164632 | 13415069 ~ 13427065 (+) | False | LOC103033837 |
| TU257060 | other | downstream | 1856865 | 14107302 ~ 14108108 (+) | True | G189621 |
