RNA id: TU81976



Basic Information


Item Value
RNA id TU81976
length 256
lncRNA type inter_gene
GC content 0.50
exon number 3
gene id G60782
representative True

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 52126117 ~ 52128147 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome
species mexican tetra
(Astyanax mexicanus)

Sequence


TCATCCACCACGGTATCAAACTCATTGTTCATCAGATCAGATAGAAAATCCTCCACTTCATCTTGCTGTAGATCACTGTTGTCGTGAAAATACTGCTGAACTGCATCAACCATCCACTCAGCCTTCTGCTGACTGTACGCTCCACCAAAGCCATTATCCACTGCTATCTGTAAAACCGGCCAGGTGTGCAGAACCGCGCGCACTCCCTCTCCAAACAACTCACGTGTAGCCGAGACCGCCGCCGCCATCTTTACCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81974 lncRNA downstream 3059 52120823 ~ 52123058 (-) True G60780
TU81955 lncRNA downstream 25889 52039791 ~ 52100228 (-) True G60768
TU81944 lncRNA downstream 181963 51942618 ~ 51944154 (-) True G60758
TU81943 lncRNA downstream 192801 51932938 ~ 51933316 (-) True G60757
TU81931 lncRNA downstream 226005 51895867 ~ 51900112 (-) False G60747
TU82004 lncRNA upstream 129980 52258127 ~ 52266433 (-) True G60798
TU82011 lncRNA upstream 290561 52418708 ~ 52419003 (-) True G60805
TU82013 lncRNA upstream 295795 52423942 ~ 52478278 (-) True G60806
TU82017 lncRNA upstream 331878 52460025 ~ 52511578 (-) True G60809
TU81991 lncRNA upstream 356282 52484429 ~ 52493904 (-) True LOC103028851
XM_022670882.1 mRNA downstream 62917 52049626 ~ 52063200 (-) True LOC103025058
XM_022670883.1 mRNA downstream 69669 52049626 ~ 52056448 (-) False LOC103025058
XM_022670881.1 mRNA downstream 69671 52049626 ~ 52056446 (-) False LOC103025058
XM_007245855.3 mRNA downstream 152221 51903224 ~ 51973896 (-) True slc6a8
XM_007245847.3 mRNA downstream 463277 51657401 ~ 51662840 (-) True LOC103034245
XM_007245817.3 mRNA upstream 3784 52131931 ~ 52153152 (-) False LOC103025375
XM_022670887.1 mRNA upstream 3784 52131931 ~ 52152946 (-) True LOC103025375
XM_022670889.1 mRNA upstream 30415 52158562 ~ 52307803 (-) False plxnb3
XM_022670890.1 mRNA upstream 30415 52158562 ~ 52257188 (-) True plxnb3
XM_007245821.3 mRNA upstream 182182 52310329 ~ 52333085 (-) True LOC103026406
TU81746 other downstream 418005 51706338 ~ 51708112 (-) True G60627
TU81451 other downstream 1293917 50827695 ~ 50832200 (-) True G60441
TU80777 other downstream 2820865 49304608 ~ 49305252 (-) True G59951
TU80719 other downstream 3042184 49062621 ~ 49083933 (-) False LOC103030200
TU80461 other downstream 4206736 47843007 ~ 47919381 (-) False selenok

Expression Profile