Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000001_05318747_05341451.mRNA |
| length | 4531 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 24 |
| gene id | CI01000001_05318747_05341451 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000001 |
| NCBI id | null |
| chromosome length | 13537560 |
| location | 5317514 ~ 5341773 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU18439 | lncRNA | downstream | 66008 | 5232386 ~ 5251506 (-) | True | G16461 |
| TU18436 | lncRNA | downstream | 127872 | 5189281 ~ 5189642 (-) | True | G16459 |
| TU18352 | lncRNA | downstream | 238973 | 5078342 ~ 5078541 (-) | True | G16400 |
| TU18340 | lncRNA | downstream | 258587 | 5058690 ~ 5058927 (-) | True | G16390 |
| TU18338 | lncRNA | downstream | 263424 | 5051494 ~ 5054090 (-) | True | G16388 |
| TU18479 | lncRNA | upstream | 8895 | 5350668 ~ 5350915 (-) | True | G16497 |
| TU18491 | lncRNA | upstream | 72477 | 5414250 ~ 5414495 (-) | True | G16509 |
| TU18494 | lncRNA | upstream | 77168 | 5418941 ~ 5419396 (-) | True | G16512 |
| TU18496 | lncRNA | upstream | 118019 | 5459792 ~ 5460018 (-) | True | G16514 |
| TU18497 | lncRNA | upstream | 120233 | 5462006 ~ 5462271 (-) | True | G16515 |
| CI01000001_05313109_05313728.mRNA | mRNA | downstream | 3786 | 5313056 ~ 5313728 (-) | True | CI01000001_05313109_05313728 |
| CI01000001_05295894_05308912.mRNA | mRNA | downstream | 8528 | 5295523 ~ 5308986 (-) | True | CI01000001_05295894_05308912 |
| CI01000001_05288832_05293421.mRNA | mRNA | downstream | 24093 | 5286756 ~ 5293421 (-) | True | CI01000001_05288832_05293421 |
| CI01000001_05205733_05220435.mRNA | mRNA | downstream | 95899 | 5204576 ~ 5221615 (-) | True | CI01000001_05205733_05220435 |
| CI01000001_05191382_05196348.mRNA | mRNA | downstream | 121166 | 5191059 ~ 5196348 (-) | True | CI01000001_05191382_05196348 |
| CI01000001_05355269_05356224.mRNA | mRNA | upstream | 12938 | 5354711 ~ 5357715 (-) | True | CI01000001_05355269_05356224 |
| CI01000001_05387081_05398706.mRNA | mRNA | upstream | 44654 | 5386427 ~ 5398706 (-) | True | CI01000001_05387081_05398706 |
| CI01000001_05403970_05409286.mRNA | mRNA | upstream | 62197 | 5403970 ~ 5409286 (-) | True | CI01000001_05403970_05409286 |
| CI01000001_05436238_05437581.mRNA | mRNA | upstream | 94032 | 5435805 ~ 5437655 (-) | True | CI01000001_05436238_05437581 |
| CI01000001_05437862_05438101.mRNA | mRNA | upstream | 95930 | 5437703 ~ 5438101 (-) | True | CI01000001_05437862_05438101 |
| TU18440 | other | downstream | 87929 | 5222777 ~ 5229585 (-) | True | G16462 |
| TU18272 | other | downstream | 359672 | 4950689 ~ 4957842 (-) | True | G16332 |
| TU17581 | other | downstream | 516119 | 4800901 ~ 4801395 (-) | True | G15736 |
| TU17476 | other | downstream | 589307 | 4614175 ~ 4618357 (-) | True | G15639 |
| TU18669 | other | upstream | 1002331 | 6344104 ~ 6347955 (-) | True | G16664 |
| TU18776 | other | upstream | 1242707 | 6584480 ~ 6615589 (-) | False | G16753 |
| TU19958 | other | upstream | 1495752 | 6837525 ~ 6890414 (-) | False | G17789 |
| TU19985 | other | upstream | 1594304 | 6936077 ~ 6937223 (-) | True | CI01000001_06932075_06937182 |
| TU20141 | other | upstream | 1909538 | 7251311 ~ 7253254 (-) | False | G17911 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00043961 | True | 2901 | mRNA | 0.53 | 23 | NC_007134.7 | 18617162 ~ 18668836 (-) |
| bowfin (Amia calva) | AMCG00009788 | True | 3605 | mRNA | 0.61 | 25 | CM030126.1 | 46129110 ~ 46151694 (-) |
