RNA id: TU73885



Basic Information


Item Value
RNA id TU73885
length 236
lncRNA type inter_gene
GC content 0.29
exon number 1
gene id G64916
representative True

Chromosome Information


Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 6061846 ~ 6062081 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAGCCCTAAATGGAAGCTGTTATCTTGCAACTTCTGAGCTCTACAAATCCTCAGTCAGAAACTTTTTAATATTATTCATAATAATATATATATATATATATATAAAAAAAACTTTCTAGGTGAAAATAATGAAACCAGTCATTTCACCTCAAAATCAACAGAAAAACAAAATAAAAATATAGCTGCTAGCAGCAATTATCGGGGTTCAAGCACTTTAAGGCTTTTAAGCACATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU73880 lncRNA downstream 3703 6032036 ~ 6058143 (-) True G64911
TU73879 lncRNA downstream 32137 6028999 ~ 6029709 (-) True G64910
TU73848 lncRNA downstream 142217 5919243 ~ 5919629 (-) True G64879
TU73836 lncRNA downstream 172089 5888945 ~ 5889757 (-) True G64867
TU73780 lncRNA downstream 180823 5827578 ~ 5881023 (-) True G64818
TU73745 lncRNA upstream 12618 6074699 ~ 6075674 (-) True G64794
TU73888 lncRNA upstream 33360 6095441 ~ 6096480 (-) True G64918
TU73781 lncRNA upstream 91091 6153172 ~ 6153751 (-) True G64819
TU73757 lncRNA upstream 104655 6166736 ~ 6181828 (-) False G64795
TU73756 lncRNA upstream 109867 6171948 ~ 6173169 (-) True G64795
CI01000010_05921406_05962819.mRNA mRNA downstream 99027 5921124 ~ 5962819 (-) True CI01000010_05921406_05962819
CI01000010_05743309_05757933.mRNA mRNA downstream 303913 5743309 ~ 5757933 (-) True CI01000010_05743309_05757933
CI01000010_05734012_05743267.mRNA mRNA downstream 318347 5733797 ~ 5743499 (-) True CI01000010_05734012_05743267
CI01000010_05672032_05717224.mRNA mRNA downstream 344190 5670007 ~ 5717656 (-) True CI01000010_05672032_05717224
CI01000010_05636005_05648665.mRNA mRNA downstream 413181 5635906 ~ 5648665 (-) True CI01000010_05636005_05648665
CI01000010_06083696_06089271.mRNA mRNA upstream 21462 6083543 ~ 6089574 (-) True CI01000010_06083696_06089271
CI01000010_06107283_06108881.mRNA mRNA upstream 43498 6105579 ~ 6108989 (-) True CI01000010_06107283_06108881
CI01000010_06180084_06216445.mRNA mRNA upstream 118003 6180084 ~ 6216445 (-) True CI01000010_06180084_06216445
CI01000010_06253230_06263855.mRNA mRNA upstream 190285 6252366 ~ 6263855 (-) True CI01000010_06253230_06263855
CI01000010_06456276_06481282.mRNA mRNA upstream 394195 6456276 ~ 6481427 (-) True CI01000010_06456276_06481282
TU73846 other downstream 144835 5916257 ~ 5917011 (-) True G64877
TU73495 other downstream 818920 5049155 ~ 5242926 (-) True G64564
TU73132 other downstream 1448290 4613485 ~ 4613556 (-) True G64230
TU73142 other downstream 1825430 4229950 ~ 4236416 (-) False G64237
TU72971 other downstream 2161935 3899741 ~ 3899911 (-) True G64080
TU73887 other upstream 31608 6093689 ~ 6096480 (-) False G64918
TU74496 other upstream 1601610 7663691 ~ 7672343 (-) False G65453
TU74478 other upstream 1780555 7842636 ~ 7873650 (-) True G65441
TU76444 other upstream 2579609 8641690 ~ 8674897 (-) True G67099
TU77386 other upstream 5866880 11928961 ~ 11932254 (-) True CI01000010_11929215_11933223

Expression Profile