RNA id: TU93037


Basic Information

Item Value
RNA id TU93037
length 215
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G81754
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6351905 ~ 6352119 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCCTACAGCATAGCACCAGCTACAGTTATCTGGGCATCGACATCAGCGCTTTGGGAAGCTTCGGTCTGGCTGTCAAAACACTGAGCGAAAAGGCTCGGAGGGCTTTCTATGCTATAAAGTCACGATGCGGTCACTTGAAAATACCCATTAACACTTGGATAAAATTATATAATTCAATAATAAAACCAGTTGTTTTATATGGATGTGAAATTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU93021 lncRNA upstream 20261 6331040 ~ 6331644 (+) True G81738
TU92942 lncRNA upstream 267010 6083474 ~ 6084895 (+) True G81672
TU92935 lncRNA upstream 269861 6079666 ~ 6082044 (+) False G81666
TU92943 lncRNA upstream 292027 6059792 ~ 6059878 (+) True CI01000013_06050285_06059640
TU92947 lncRNA upstream 301515 6028609 ~ 6029518 (+) True G81677
TU93045 lncRNA downstream 29703 6381822 ~ 6426042 (+) True G81762
TU93063 lncRNA downstream 35720 6387839 ~ 6388687 (+) True G81780
TU93048 lncRNA downstream 96444 6448563 ~ 6449178 (+) True G81765
TU93072 lncRNA downstream 99340 6451459 ~ 6451669 (+) True G81789
TU93073 lncRNA downstream 99606 6451725 ~ 6451932 (+) True G81790
CI01000013_06311729_06313001.mRNA mRNA upstream 37781 6311729 ~ 6314124 (+) True CI01000013_06311729_06313001
CI01000013_06278898_06283356.mRNA mRNA upstream 66751 6278898 ~ 6285154 (+) True CI01000013_06278898_06283356
CI01000013_06209318_06233289.mRNA mRNA upstream 118522 6209096 ~ 6233383 (+) True CI01000013_06209318_06233289
CI01000013_06132773_06163282.mRNA mRNA upstream 188268 6132565 ~ 6163637 (+) True CI01000013_06132773_06163282
CI01000013_06076169_06080164.mRNA mRNA upstream 271544 6075400 ~ 6080361 (+) False CI01000013_06076169_06080164
CI01000013_06405275_06423872.mRNA mRNA downstream 52077 6404196 ~ 6424521 (+) True CI01000013_06405275_06423872
CI01000013_06440333_06446814.mRNA mRNA downstream 87507 6439626 ~ 6447195 (+) True CI01000013_06440333_06446814
CI01000013_06548714_06565582.mRNA mRNA downstream 195850 6547969 ~ 6566123 (+) True CI01000013_06548714_06565582
CI01000013_06635640_06638681.mRNA mRNA downstream 283231 6635350 ~ 6639000 (+) True CI01000013_06635640_06638681
CI01000013_06705612_06716925.mRNA mRNA downstream 353493 6705612 ~ 6717106 (+) True CI01000013_06705612_06716925
TU92936 other upstream 269538 6079666 ~ 6082367 (+) True G81666
TU92951 other upstream 292409 6056662 ~ 6056782 (+) True G81681
TU92027 other upstream 1515673 4835078 ~ 4836232 (+) True G80845
TU91262 other upstream 2286076 4064933 ~ 4065829 (+) True CI01000013_04051081_04064651
TU91155 other upstream 2767121 3584008 ~ 3584784 (+) True G80062
TU93312 other downstream 983826 7335945 ~ 7338239 (+) True G81994
TU93521 other downstream 1676219 8028338 ~ 8041343 (+) True G82168
TU93966 other downstream 2977210 9329329 ~ 9334948 (+) True G82581
TU95556 other downstream 3249492 9601611 ~ 9602235 (+) False G84005
TU95558 other downstream 3249492 9601611 ~ 9602184 (+) False G84005

Expression Profile