RNA id: TU97399


Basic Information

Item Value
RNA id TU97399
length 292
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G85585
representative True

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 11435862 ~ 11436153 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGCGAGTTGCGAATTGCAGAATTTTCTCGCAATTAACTGATGGACAGTGTCTCTGTCTGTAACAATTACGGACATCCAACATTTCTGGTGCATCCAACGATAGCCGTGCTGCCGTTCTGATGTCTGAAGCTGTTGATGTATAAAATGTGCCACTTAAGCTTCGTCTGTTTTATTGCGCCTCCGCCACAGCTGATTCTTATTATTATTACTATTATATTGTTATTATTGTGTCAAATTCATTAGTGTATCCATTCTGTTAAAAACAACTTTTATTCACCAAATACTTCCACT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU97380 lncRNA downstream 14571 11417265 ~ 11421291 (-) True G85570
TU97378 lncRNA downstream 20512 11413643 ~ 11415350 (-) True G85569
TU97360 lncRNA downstream 121877 11313773 ~ 11313985 (-) True G85557
TU97238 lncRNA downstream 132278 11300622 ~ 11303584 (-) True G85445
TU97237 lncRNA downstream 142829 11291867 ~ 11293033 (-) True G85444
TU97449 lncRNA upstream 128979 11565132 ~ 11565506 (-) True G85620
TU97467 lncRNA upstream 157148 11593301 ~ 11595301 (-) True G85632
TU97501 lncRNA upstream 245030 11681183 ~ 11683033 (-) True G85661
TU97518 lncRNA upstream 269972 11706125 ~ 11706464 (-) True G85676
TU97247 lncRNA upstream 334596 11770749 ~ 11775434 (-) True G85454
CI01000013_11422924_11427360.mRNA mRNA downstream 8502 11422719 ~ 11427360 (-) True CI01000013_11422924_11427360
CI01000013_11368665_11383592.mRNA mRNA downstream 52270 11368567 ~ 11383592 (-) True CI01000013_11368665_11383592
CI01000013_11343431_11351259.mRNA mRNA downstream 84051 11342573 ~ 11351811 (-) True CI01000013_11343431_11351259
CI01000013_11308893_11311699.mRNA mRNA downstream 124163 11307795 ~ 11311699 (-) True CI01000013_11308893_11311699
CI01000013_11280259_11284882.mRNA mRNA downstream 150980 11280184 ~ 11284882 (-) True CI01000013_11280259_11284882
CI01000013_11438137_11444770.mRNA mRNA upstream 1912 11438065 ~ 11445168 (-) True CI01000013_11438137_11444770
CI01000013_11453318_11457266.mRNA mRNA upstream 16960 11453113 ~ 11458060 (-) True CI01000013_11453318_11457266
CI01000013_11468322_11475130.mRNA mRNA upstream 32008 11468161 ~ 11475130 (-) True CI01000013_11468322_11475130
CI01000013_11480488_11512738.mRNA mRNA upstream 44335 11480488 ~ 11512738 (-) True CI01000013_11480488_11512738
CI01000013_11516609_11563528.mRNA mRNA upstream 80138 11516291 ~ 11563528 (-) True CI01000013_11516609_11563528
TU97193 other downstream 400396 11035032 ~ 11035466 (-) True G85401
TU96958 other downstream 840525 10592204 ~ 10595337 (-) True G85188
TU96941 other downstream 863422 10572377 ~ 10572440 (-) True G85180
TU96930 other downstream 955162 10479861 ~ 10480700 (-) True G85170
TU95233 other downstream 2113018 9307036 ~ 9322844 (-) True CI01000013_09309438_09335834
TU97461 other upstream 162907 11600778 ~ 11600941 (-) True G85628

Expression Profile