RNA id: TU98468


Basic Information

Item Value
RNA id TU98468
length 299
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G86472
representative True

Chromosome Information

Item Value
chromosome id CI01000014
NCBI id null
chromosome length 1317303
location 748046 ~ 748344 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGCATGTGTTCATAATTACTTTGCATGACAGCCTCGCCAAAAATAATTTGAAATAATTTGAAATTTCATTTCATTATCACACATGAAACAATTGACTCCAAGCACAGCTACACGATATGCTTACATCTTTTAACACATTTTTAAAAAATATTTGAATTAAGGTTGAAGATGTCAGTTTTCATATGGCTGGACATCACATTTGGCCACTACTCTATGGCAGTTCATTGACCATCAAACCATGTGGCAAAAGCAAGCCACTCTTATGTTGACTGTGGGCTTCGCTGGAGTTGTTGGAGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU98466 lncRNA downstream 721 747087 ~ 747325 (-) True G86470
TU98405 lncRNA downstream 205170 542577 ~ 542876 (-) True G86411
TU98402 lncRNA downstream 211192 536609 ~ 536854 (-) True G86408
TU98396 lncRNA downstream 310273 437539 ~ 437773 (-) True G86402
TU98375 lncRNA downstream 325537 422128 ~ 422509 (-) True G86386
TU98469 lncRNA upstream 152 748496 ~ 748847 (-) True G86473
TU98470 lncRNA upstream 733 749077 ~ 749578 (-) True G86474
TU98478 lncRNA upstream 9619 757963 ~ 758187 (-) True G86482
TU98479 lncRNA upstream 9940 758284 ~ 758606 (-) True G86483
TU98487 lncRNA upstream 17113 765457 ~ 765936 (-) True G86491
CI01000014_00696364_00697192.mRNA mRNA downstream 50854 696364 ~ 697192 (-) True CI01000014_00696364_00697192
CI01000014_00672822_00683285.mRNA mRNA downstream 64184 672235 ~ 683862 (-) True CI01000014_00672822_00683285
CI01000014_00660099_00665508.mRNA mRNA downstream 82348 659990 ~ 665698 (-) True CI01000014_00660099_00665508
CI01000014_00466896_00506088.mRNA mRNA downstream 241958 466212 ~ 506088 (-) True CI01000014_00466896_00506088
CI01000014_00094545_00097426.mRNA mRNA downstream 650620 94176 ~ 97426 (-) True CI01000014_00094545_00097426
CI01000014_00753559_00756594.mRNA mRNA upstream 5140 753484 ~ 756594 (-) True CI01000014_00753559_00756594
CI01000014_00775503_00794925.mRNA mRNA upstream 26534 774878 ~ 794925 (-) True CI01000014_00775503_00794925
CI01000014_00821373_00846608.mRNA mRNA upstream 72830 821174 ~ 848060 (-) True CI01000014_00821373_00846608
CI01000014_00852874_00874645.mRNA mRNA upstream 104171 852515 ~ 874736 (-) True CI01000014_00852874_00874645
CI01000014_00880909_00886292.mRNA mRNA upstream 132397 880741 ~ 886292 (-) True CI01000014_00880909_00886292
TU98536 other upstream 236874 985218 ~ 985744 (-) True G86530
TU98538 other upstream 239200 987544 ~ 988027 (-) True G86532

Expression Profile