RNA id: TU169679



Basic Information


Item Value
RNA id TU169679
length 220
lncRNA type inter_gene
GC content 0.59
exon number 1
gene id G149384
representative True

Chromosome Information


Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 6603966 ~ 6604185 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTCCCACCTCCGCTACAAAGCTCAACCAGTCCTTCACTCCCACCTCAGCTAGTTCTCGTAAAAGCCTTACCGTCACAAGCTTCACTTGGGCTAGTGGATCCCCTGGCTCTCCCTCCGTCTGCTGATCCTTCTCTCCACCTCGGCTCGTTGACCTGTTGGCTTCGCCTTGGCTCCTCCCATCCTCGGCTCCACCAGAGACCCTTGGCCTTATGGGGTTCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU169633 lncRNA downstream 39933 6563385 ~ 6564033 (-) True G149342
TU169629 lncRNA downstream 71053 6531184 ~ 6532913 (-) True G149338
TU168998 lncRNA downstream 197709 6406017 ~ 6406257 (-) True G148768
TU168996 lncRNA downstream 199121 6404624 ~ 6404845 (-) True G148766
TU168978 lncRNA downstream 227266 6376359 ~ 6376700 (-) True G148748
TU169704 lncRNA upstream 54873 6659058 ~ 6659737 (-) True G149405
TU169712 lncRNA upstream 87212 6691397 ~ 6691607 (-) True G149411
TU169715 lncRNA upstream 90700 6694885 ~ 6695129 (-) True G149414
TU169716 lncRNA upstream 91655 6695840 ~ 6696043 (-) True G149415
TU169727 lncRNA upstream 121847 6726032 ~ 6726294 (-) True G149426
CI01000028_06565728_06571617.mRNA mRNA downstream 31944 6564707 ~ 6572022 (-) True CI01000028_06565728_06571617
CI01000028_06199637_06208451.mRNA mRNA downstream 394973 6198701 ~ 6208993 (-) True CI01000028_06199637_06208451
CI01000028_06092667_06094044.mRNA mRNA downstream 509371 6092188 ~ 6094595 (-) True CI01000028_06092667_06094044
CI01000028_06079297_06089526.mRNA mRNA downstream 514280 6079192 ~ 6089686 (-) True CI01000028_06079297_06089526
CI01000028_06025232_06034863.mRNA mRNA downstream 569071 6024412 ~ 6034895 (-) True CI01000028_06025232_06034863
CI01000028_06681287_06690095.mRNA mRNA upstream 76983 6681168 ~ 6690168 (-) True CI01000028_06681287_06690095
CI01000028_06736522_06738241.mRNA mRNA upstream 132295 6736480 ~ 6738241 (-) True CI01000028_06736522_06738241
CI01000028_06756364_06785862.mRNA mRNA upstream 152158 6756343 ~ 6788590 (-) True CI01000028_06756364_06785862
CI01000028_06930121_06933901.mRNA mRNA upstream 325638 6929823 ~ 6934781 (-) True CI01000028_06930121_06933901
CI01000028_06937034_06956621.mRNA mRNA upstream 332633 6936818 ~ 6956621 (-) True CI01000028_06937034_06956621
TU166214 other downstream 4157653 2445722 ~ 2446313 (-) True G146272
TU166174 other downstream 4443928 2147378 ~ 2160038 (-) True G146238
TU166103 other downstream 4492701 2097570 ~ 2111265 (-) True G146190
TU164620 other downstream 6128620 475313 ~ 475346 (-) True G144886
TU164586 other downstream 6468178 135392 ~ 135788 (-) False G144855
TU169615 other upstream 95328 6699513 ~ 6701240 (-) True G149329
TU169770 other upstream 366572 6971561 ~ 6971711 (-) True G149468
TU169776 other upstream 625606 7229791 ~ 7232783 (-) True G149474
TU169985 other upstream 921777 7525962 ~ 7535743 (-) False CI01000028_07527725_07535631
TU169984 other upstream 921829 7526014 ~ 7535743 (-) True CI01000028_07527725_07535631

Expression Profile