RNA id: TU185663


Basic Information

Item Value
RNA id TU185663
length 377
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G163415
representative True

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 7652602 ~ 7652978 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCTGTGGTGCAAGAAAATGAACAAAATTTTTAATTTGAACAAAACTTTCAATTTCAAAATATTTCTAATAGTTGACACATGCTATTATAAACTTACATGTTTAAAGTAACAGCTCAACCAAAACTTAAAAAGTAGAAATTAAACTCTCTGGTGCTGTTCGGTCTTTTTATTTATTTAATTTTTTAACCCAAAAAATTGGACATCTTGGTTTTTTAGAATTGACTTCGTCGGAATGGTAAAAAACTTGGTTAAGGTTTTGGCACTTGCTAAGTGAAAAAACAACCACAACAAAAACAGGTTAAATGGTCCTGAAAAATAGTCACTTGTACTGTTCGCTGTCAAAAATGACTGCATCCTAAATGAATGGGAAGCAAATT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185407 lncRNA downstream 717 7649961 ~ 7651885 (-) True G163181
TU185406 lncRNA downstream 793 7649830 ~ 7651809 (-) False G163181
TU185571 lncRNA downstream 47715 7603173 ~ 7604887 (-) True G163338
TU185396 lncRNA downstream 112136 7539093 ~ 7540466 (-) True G163172
TU185392 lncRNA downstream 142131 7510133 ~ 7510471 (-) True G163170
TU185664 lncRNA upstream 2061 7655039 ~ 7655614 (-) True G163416
TU185681 lncRNA upstream 50430 7703408 ~ 7703709 (-) True G163433
TU185683 lncRNA upstream 74215 7727193 ~ 7727403 (-) True G163435
TU185687 lncRNA upstream 128266 7781244 ~ 7781552 (-) True G163439
TU185691 lncRNA upstream 149154 7802132 ~ 7802579 (-) True CI01000030_07802211_07804196
CI01000030_07548087_07549591.mRNA mRNA downstream 102656 7547512 ~ 7549946 (-) True CI01000030_07548087_07549591
CI01000030_07494612_07513546.mRNA mRNA downstream 138424 7493560 ~ 7514178 (-) False CI01000030_07494612_07513546
CI01000030_07438282_07471671.mRNA mRNA downstream 178805 7437214 ~ 7473797 (-) True CI01000030_07438282_07471671
CI01000030_07274776_07276578.mRNA mRNA downstream 375757 7274142 ~ 7276845 (-) True CI01000030_07274776_07276578
CI01000030_07251323_07260721.mRNA mRNA downstream 391881 7251323 ~ 7260721 (-) True CI01000030_07251323_07260721
CI01000030_07710486_07714016.mRNA mRNA upstream 56818 7709796 ~ 7714151 (-) True CI01000030_07710486_07714016
CI01000030_07716863_07718632.mRNA mRNA upstream 63739 7716717 ~ 7719119 (-) True CI01000030_07716863_07718632
CI01000030_07726597_07733277.mRNA mRNA upstream 73411 7726389 ~ 7734589 (-) True CI01000030_07726597_07733277
CI01000030_07736031_07737720.mRNA mRNA upstream 82768 7735746 ~ 7737720 (-) False CI01000030_07736031_07737720
CI01000030_07749038_07754607.mRNA mRNA upstream 95808 7748786 ~ 7754607 (-) True CI01000030_07749038_07754607
TU185332 other downstream 502458 7149474 ~ 7150144 (-) True G163139
TU185223 other downstream 726945 6924483 ~ 6925657 (-) True G163065
TU183403 other downstream 900191 6743298 ~ 6745350 (-) True G161515
TU183401 other downstream 900286 6743258 ~ 6745350 (-) False G161515
TU185612 other upstream 82458 7737975 ~ 7738004 (-) True G163364
TU185614 other upstream 135819 7792243 ~ 7792382 (-) True G163366
TU185749 other upstream 538941 8192404 ~ 8192486 (-) True G163498
TU186160 other upstream 1280435 8933413 ~ 8933982 (-) True G163873
TU185995 other upstream 1634228 9287206 ~ 9302149 (-) True G163710

Expression Profile