RNA id: TU186687


Basic Information

Item Value
RNA id TU186687
length 419
lncRNA type read_through
GC content 0.32
exon number 2
gene id G164333
representative True

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10747109 ~ 10756128 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTTTCTTGACGTTAGAGGAACGTTTTTTATAAAGTATAATGTTCCTCAAACGTTCTTTCAACTTAATTTTGATTTAAAATTCAACATTGTAGGAACGTTGATTTGTAACATTCCAAGAACATAAAAATGTCCAGTTTCCTTAATGTTAGTAGAATGTTATTTAAAGGTTAGTATGATGTTCCTGAAACATTCTTTCAATCATTCAAACACCTGCTGTGAACAAACACTGAAAGAAAGAGAAATAAGAACACAAACTACAACTTTCTTCAGCCACAGCCTTAGATGAACTGAAGATAAAAGACATTAAATCTCTGAAGATCTGATTCAACAACTCCACAAACAGCATTACCAGCTTCACTTATTACTAACCAGACTGACTTTATTTCTGTCACACGTCTACAGAAGCTCTTATTGAGAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU185922 lncRNA downstream 75083 10670248 ~ 10672026 (-) True G163644
TU185926 lncRNA downstream 117285 10626507 ~ 10629824 (-) True G163648
TU186641 lncRNA downstream 181313 10534515 ~ 10565796 (-) True G164289
TU186637 lncRNA downstream 230025 10516854 ~ 10517084 (-) True G164285
TU186636 lncRNA downstream 230429 10516448 ~ 10516680 (-) True G164284
TU186702 lncRNA upstream 29601 10785729 ~ 10786207 (-) True G164347
TU186703 lncRNA upstream 32632 10788760 ~ 10788980 (-) True G164348
TU185984 lncRNA upstream 38902 10795030 ~ 10796442 (-) True G163699
TU186708 lncRNA upstream 101137 10857265 ~ 10857551 (-) True G164353
TU186061 lncRNA upstream 115226 10871354 ~ 10879099 (-) True G163776
CI01000030_10732075_10737200.mRNA mRNA downstream 9574 10731349 ~ 10737535 (-) True CI01000030_10732075_10737200
CI01000030_10705288_10715416.mRNA mRNA downstream 31524 10704934 ~ 10715585 (-) True CI01000030_10705288_10715416
CI01000030_10654923_10662255.mRNA mRNA downstream 83841 10654916 ~ 10663268 (-) True CI01000030_10654923_10662255
CI01000030_10635543_10640525.mRNA mRNA downstream 106501 10635417 ~ 10640608 (-) True CI01000030_10635543_10640525
CI01000030_10592588_10595113.mRNA mRNA downstream 151807 10591754 ~ 10595302 (-) True CI01000030_10592588_10595113
CI01000030_10771736_10772503.mRNA mRNA upstream 15415 10771543 ~ 10772780 (-) True CI01000030_10771736_10772503
CI01000030_10797691_10834282.mRNA mRNA upstream 41330 10797458 ~ 10836927 (-) True CI01000030_10797691_10834282
CI01000030_10865700_10868055.mRNA mRNA upstream 109136 10865264 ~ 10869004 (-) True CI01000030_10865700_10868055
CI01000030_10886966_10901232.mRNA mRNA upstream 130466 10886594 ~ 10904464 (-) True CI01000030_10886966_10901232
CI01000030_10919162_10925437.mRNA mRNA upstream 162918 10919046 ~ 10925437 (-) True CI01000030_10919162_10925437
TU186031 other downstream 354930 10392048 ~ 10392179 (-) True CI01000030_10374567_10392087
TU186081 other downstream 380754 10365417 ~ 10366355 (-) True CI01000030_10343879_10366274
TU186048 other downstream 427004 10318595 ~ 10320105 (-) True CI01000030_10313822_10320039
TU186002 other downstream 625389 10121592 ~ 10121720 (-) True G163717
TU186385 other downstream 1270845 9475188 ~ 9476264 (-) True G164071
TU186808 other upstream 738210 11512598 ~ 11512682 (-) True G164443

Expression Profile