RNA id: TU185984



Basic Information


Item Value
RNA id TU185984
length 1413
lncRNA type antisense_over
GC content 0.36
exon number 1
gene id G163699
representative True

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10795030 ~ 10796442 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACACTTGAACCCATCTTTCATACACTTTTAAATATACTTATCAGACATAGAAAATAGGCTTTATTTAAAATATAAGAATAATATATAATGTATACAAAATGTATTTATAATATATTGCCCACATATTTTTATATATTAAATCATTCATTGTTTAGCACAAAAAAATAAGAATGTACTACAAATGTACTAAAAAGTGCAAAAATCTACAAGAAAAATGTGCAAAAATGTATGATACCACTGTTCAACAATGTCTGCAGAATATAAAACTGGATTTAAAAAAAAAATACTTTAGATTATATCTACATATTAGGTTTCATACAAAATAGAAAAATGATCTCCTGCCTGAATTGTGTCATATTTAGCCTGCTCAGGGATACAATGGTCTGGTTTGCTCTGTGCTGCACTGACAAGAGAACTACCAGAAAAGCCTGCTCAAATAAAGTACAGAATGAATCCTGAAAAAGGAATTAAGAGGTGGAAAGTCCTTCCCAGGCTTGTTCCTGTATCATGGGCTCTTTCTTCAACTGCTGAGTATTTGGTTAATGGTCGTTCTGTTAAGGAAAAAAAATTAGTTAAAAAATAAACATTCAGAAAGCTATTAGTTAAAGGTGCAGTATTGACAGTAGTGGTTGAAATGGGTACTGCTGTCCAAATTCAAAATATTAGATAGAGTTGTTTGTCCTGCCCTCCTCAGACTCGATGCTTATGCTGGTGGCCAGATTGAGAACACGTAATAGGAACGAGCACAAATGACAATGGAAGGCGACTAGCTTTACACTGTAAGTTGATGAGTTGATTTATCCATGTTTTAATATGCCTCTGGTCATAAAGCTTTTTAGATGGATGCCAAGGCTTTTTAGGTCAGGTCGAATCTGTGATCTCTGACCTAGCTTTTTTGCTGGCTTCCATGGATGCAATACGCTGCTATTTTTATGCTTGACATACAGCACCTTTAATATGTGATGACCAAAATATGTGTGACATGCAAATACAAATTTTAGAAGATGTTAAGGCTATTTCAAACTAAATTTTTTAGATTACAAACACATAGAAACTCCAATGTGTAGAGTTAGGAGTTATTAAATACCTTTGACCACCAGTTGTGTACTGTGATGATGTCTCGCATCTGGAACAAAACAGAGGAACGTTCCTCTATCGGAGAGCTGAAGATCGGTGAGTTTGAGAAAGATCTGGCCCTTCTCGAGCTCTTCAGATAAAACTTCAGCTCTGTTCTTGTACGCTGGGTCTTGTTCCTTTACAGAAACTTCTCCCTGGATAATATCATATACATTCCTGGTGTCGTTGTGTCTCCAGTGGACTGTCAGATATTTTTCTTCAAGTACAGTGCTTCTGTTGCTGCACAGCAAAACGACAGAGCCTCCTTCAACGCCTTCAACCAACCTGTGCAGAGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186703 lncRNA downstream 6050 10788760 ~ 10788980 (-) True G164348
TU186702 lncRNA downstream 8823 10785729 ~ 10786207 (-) True G164347
TU186687 lncRNA downstream 38902 10747109 ~ 10756128 (-) True G164333
TU185922 lncRNA downstream 123004 10670248 ~ 10672026 (-) True G163644
TU185926 lncRNA downstream 165206 10626507 ~ 10629824 (-) True G163648
TU186708 lncRNA upstream 60823 10857265 ~ 10857551 (-) True G164353
TU186061 lncRNA upstream 74912 10871354 ~ 10879099 (-) True G163776
TU186717 lncRNA upstream 110067 10906509 ~ 10906740 (-) True G164362
TU186718 lncRNA upstream 112105 10908547 ~ 10908933 (-) True G164363
TU186719 lncRNA upstream 113722 10910164 ~ 10910417 (-) True G164364
CI01000030_10771736_10772503.mRNA mRNA downstream 22250 10771543 ~ 10772780 (-) True CI01000030_10771736_10772503
CI01000030_10732075_10737200.mRNA mRNA downstream 57495 10731349 ~ 10737535 (-) True CI01000030_10732075_10737200
CI01000030_10705288_10715416.mRNA mRNA downstream 79445 10704934 ~ 10715585 (-) True CI01000030_10705288_10715416
CI01000030_10654923_10662255.mRNA mRNA downstream 131762 10654916 ~ 10663268 (-) True CI01000030_10654923_10662255
CI01000030_10635543_10640525.mRNA mRNA downstream 154422 10635417 ~ 10640608 (-) True CI01000030_10635543_10640525
CI01000030_10797691_10834282.mRNA mRNA upstream 1016 10797458 ~ 10836927 (-) True CI01000030_10797691_10834282
CI01000030_10865700_10868055.mRNA mRNA upstream 68822 10865264 ~ 10869004 (-) True CI01000030_10865700_10868055
CI01000030_10886966_10901232.mRNA mRNA upstream 90152 10886594 ~ 10904464 (-) True CI01000030_10886966_10901232
CI01000030_10919162_10925437.mRNA mRNA upstream 122604 10919046 ~ 10925437 (-) True CI01000030_10919162_10925437
CI01000030_10944729_10953518.mRNA mRNA upstream 148287 10944729 ~ 10953518 (-) True CI01000030_10944729_10953518
TU186031 other downstream 402851 10392048 ~ 10392179 (-) True CI01000030_10374567_10392087
TU186081 other downstream 428675 10365417 ~ 10366355 (-) True CI01000030_10343879_10366274
TU186048 other downstream 474925 10318595 ~ 10320105 (-) True CI01000030_10313822_10320039
TU186002 other downstream 673310 10121592 ~ 10121720 (-) True G163717
TU186385 other downstream 1318766 9475188 ~ 9476264 (-) True G164071
TU186808 other upstream 697896 11512598 ~ 11512682 (-) True G164443

Expression Profile