RNA id: TU186636


Basic Information

Item Value
RNA id TU186636
length 233
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G164284
representative True

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10516448 ~ 10516680 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTTCACTAATCCATAATCATAAAGACACTTATCATAATAAGCATGCTAAATGATAAATCTAAATCTATTTTAGGTTTATAAGCTGCAACAATCAGATAATGTAAGTAATGATGCATGATGGAGTGGTTACAGTGGTTACATCACGAGGCATAAGGTCACTTTTCAAAAGATTTACTCCAGAAACATTCAACCTCCACTAGATCTGCTGAAATATGAAAAAGCTAAAGGCAAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186042 lncRNA downstream 7316 10506794 ~ 10509132 (-) True G163757
TU186034 lncRNA downstream 25462 10490782 ~ 10490986 (-) True G163749
TU186032 lncRNA downstream 87191 10421858 ~ 10429257 (-) True G163747
TU185970 lncRNA downstream 89854 10423936 ~ 10426594 (-) True G163685
TU186606 lncRNA downstream 132417 10367448 ~ 10384031 (-) True G164258
TU186637 lncRNA upstream 174 10516854 ~ 10517084 (-) True G164285
TU186641 lncRNA upstream 17835 10534515 ~ 10565796 (-) True G164289
TU185926 lncRNA upstream 109827 10626507 ~ 10629824 (-) True G163648
TU185922 lncRNA upstream 153568 10670248 ~ 10672026 (-) True G163644
TU186687 lncRNA upstream 230429 10747109 ~ 10756128 (-) True G164333
CI01000030_10443696_10457604.mRNA mRNA downstream 58641 10443691 ~ 10457807 (-) True CI01000030_10443696_10457604
CI01000030_10398430_10417482.mRNA mRNA downstream 98761 10398125 ~ 10417687 (-) True CI01000030_10398430_10417482
CI01000030_10374567_10392087.mRNA mRNA downstream 122481 10373148 ~ 10393967 (-) False CI01000030_10374567_10392087
CI01000030_10343879_10366274.mRNA mRNA downstream 149940 10343865 ~ 10366508 (-) False CI01000030_10343879_10366274
CI01000030_10321881_10332415.mRNA mRNA downstream 182998 10321871 ~ 10333450 (-) True CI01000030_10321881_10332415
CI01000030_10552198_10557500.mRNA mRNA upstream 35385 10552065 ~ 10557995 (-) True CI01000030_10552198_10557500
CI01000030_10577987_10580431.mRNA mRNA upstream 61264 10577944 ~ 10580726 (-) True CI01000030_10577987_10580431
CI01000030_10592588_10595113.mRNA mRNA upstream 75074 10591754 ~ 10595302 (-) True CI01000030_10592588_10595113
CI01000030_10635543_10640525.mRNA mRNA upstream 118737 10635417 ~ 10640608 (-) True CI01000030_10635543_10640525
CI01000030_10654923_10662255.mRNA mRNA upstream 138236 10654916 ~ 10663268 (-) True CI01000030_10654923_10662255
TU186031 other downstream 124269 10392048 ~ 10392179 (-) True CI01000030_10374567_10392087
TU186081 other downstream 150093 10365417 ~ 10366355 (-) True CI01000030_10343879_10366274
TU186048 other downstream 196343 10318595 ~ 10320105 (-) True CI01000030_10313822_10320039
TU186002 other downstream 394728 10121592 ~ 10121720 (-) True G163717
TU186385 other downstream 1040184 9475188 ~ 9476264 (-) True G164071
TU186808 other upstream 977658 11512598 ~ 11512682 (-) True G164443

Expression Profile