RNA id: TU186606


Basic Information

Item Value
RNA id TU186606
length 329
lncRNA type sense_over
GC content 0.29
exon number 3
gene id G164258
representative True

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10367448 ~ 10384031 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCTAAATGCATAAATGTAATATAAAAATAGTGATGTTGAAACAAAGCTTTGCTTACCAATGCTGTCCTCAGAAATCTAACAAGAGTTATCATGCCAAAGCAATGGAATATTACTGCTTCACAACATCATCCTGTGACGTTAAAAACATTGAAATGAAGACAATATCTCTTACTCGTGTAAACAAATATCTCTCAAAACTACACAATCATAAGATTAAACAACAATAGAAAGCATTGCAAGAACGAGGAAAATAATAATATAATAAAAATGAATAAATGAATGAGGAAAAAACAAAGACAATAAAACATAATTCACATACGGTTACTCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU186060 lncRNA downstream 27118 10305266 ~ 10340330 (-) True G163775
TU185982 lncRNA downstream 50497 10315147 ~ 10316951 (-) True G163697
TU186001 lncRNA downstream 68271 10298980 ~ 10299177 (-) True CI01000030_10297963_10300335
TU186575 lncRNA downstream 142560 10222447 ~ 10224888 (-) True G164232
TU186564 lncRNA downstream 156639 10203655 ~ 10210809 (-) True G164224
TU186032 lncRNA upstream 37827 10421858 ~ 10429257 (-) True G163747
TU185970 lncRNA upstream 39905 10423936 ~ 10426594 (-) True G163685
TU186042 lncRNA upstream 122763 10506794 ~ 10509132 (-) True G163757
TU186636 lncRNA upstream 132417 10516448 ~ 10516680 (-) True G164284
TU186637 lncRNA upstream 132823 10516854 ~ 10517084 (-) True G164285
CI01000030_10343879_10366274.mRNA mRNA downstream 940 10343865 ~ 10366508 (-) False CI01000030_10343879_10366274
CI01000030_10321881_10332415.mRNA mRNA downstream 33998 10321871 ~ 10333450 (-) True CI01000030_10321881_10332415
CI01000030_10313822_10320039.mRNA mRNA downstream 47355 10313723 ~ 10320093 (-) False CI01000030_10313822_10320039
CI01000030_10297963_10300335.mRNA mRNA downstream 66789 10297472 ~ 10300659 (-) False CI01000030_10297963_10300335
CI01000030_10280046_10287211.mRNA mRNA downstream 80198 10279978 ~ 10287250 (-) False CI01000030_10280046_10287211
CI01000030_10398430_10417482.mRNA mRNA upstream 14094 10398125 ~ 10417687 (-) True CI01000030_10398430_10417482
CI01000030_10443696_10457604.mRNA mRNA upstream 59660 10443691 ~ 10457807 (-) True CI01000030_10443696_10457604
CI01000030_10552198_10557500.mRNA mRNA upstream 168034 10552065 ~ 10557995 (-) True CI01000030_10552198_10557500
CI01000030_10577987_10580431.mRNA mRNA upstream 193913 10577944 ~ 10580726 (-) True CI01000030_10577987_10580431
CI01000030_10592588_10595113.mRNA mRNA upstream 207723 10591754 ~ 10595302 (-) True CI01000030_10592588_10595113
TU186081 other downstream 1093 10365417 ~ 10366355 (-) True CI01000030_10343879_10366274
TU186048 other downstream 47343 10318595 ~ 10320105 (-) True CI01000030_10313822_10320039
TU186002 other downstream 245728 10121592 ~ 10121720 (-) True G163717
TU186385 other downstream 891184 9475188 ~ 9476264 (-) True G164071
TU185995 other downstream 1065299 9287206 ~ 9302149 (-) True G163710
TU186808 other upstream 1110307 11512598 ~ 11512682 (-) True G164443

Expression Profile