RNA id: CI01000030_10313822_10320039.mRNA



Basic Information


Item Value
RNA id CI01000030_10313822_10320039.mRNA
length 1536
RNA type mRNA
GC content 0.44
exon number 7
gene id CI01000030_10313822_10320039
representative False

Chromosome Information


Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 10313723 ~ 10320105 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ACAATCTGTCTCTCACAGTGAGTGGTCACATATTTCAAGCACTGTTATTTAAAGATGGTTCATCTGTTTATTTTGTGCTACATGTGGCATATGGCTGGTGTGTTTGGTGATTCAGTGTCAGTGATGGAGGGAGATTCTGTCACTTTATACACTGATCTTACTGAAAGAGATGAAGATGACTACATACTGTGGAAATATGGAGCTGAAAACTCTCTCATAGCTGAAATGAATAGAGCTGCTGGAATATTCTCCACATCTGATGATGTTCTTGATGGGAGATTCAGAGACAGACTGAAGCTGGACGATCAAACTGGATCTCTGACCATCACAAACATCACAACTGAACATGCTGGAGTTTATGAACTAGAGATAATGGGAGTGAAACGATCATCAAAAACATTCAATGTTTCTGTCTACGCTCGTCTGCCTGTTCCTGTCATCAGCAGTAACTCTTCACAATGTTCTTCATCATCATCATCATCAAATTGTTCATTGGTGTGTTCAGCTGTGAATGTGGGTCATGTGACTCTCTCCTGGTACAAAGGAAACAGTTTATTGTCCAGCATCAGTGTGTCTGATCTCAGCATCAGTCTCTCTCTACCTCTGGAGGTGGAATATCAGGATAAAAACACCTACAGCTGTGTGCTGAACAATCTCATCAGAAACCAGACTCAACATCTGGACATCACTCAACTCTGTCACACATGTGCAGAAGGCCACGCCCACTGTTGTGATTCTGTTGAAGCTGTGCTCCGATTGGTCGTCACTGCTCTGATGGGCGTGGCTGCTGCTGCTGCTGCTGTTCTTCTGGTCAATGACGTCAGAGCTACAAGAGGATTCCCTAGAGTCATAGGAGCACTAGACAGCACACATGTTGCAATCTCAACAGCTCTAGGAGAACATGAGGCAGATTATGTGAATAGAAAATCCTTTCACAGCCTTAATATTCAGATGACTTGTGATCATGAATGTATGATCACAAGCTTGGATGCCAAATGGCCTGGCTCAGTGCATGACTCAAGAATTTTCCGTGAGTCTGTGTTGTGTCAGCGCTTTGAGGAAGGGCTTTTTGACGGCCTGTTGGTAGGAGACAGGGGTTATGCATGCCAGAGGTTTTTGCTAACGCCTTATCCTGACCCTCAGTCAGGGCCACAAAACCGCTTCAGTGTGGCCCTCAGTAAAACCAGGGTCAAGATCGAGATGACCTTTGGCATCCTAAAGGCACGTTTCAACTGCCTTCGGCGTTTAAGAGTGTCACCAGAGAGAGCATCACAGATTGTAGCTGCATGTGCCATTCTGCATAATATAGCCGCAATCAGAAAGGAGCGATTACCACCACAGAACCAACATCTCCCCAATGAAATTGACCCCATCACACTTGACCACCCAGCTGGCGCAGCTGTCAGAGATGCAATTACCATACAATATTTCACTTAATAAAAGCACATTGAAACTGCATAGGTCTTTTGTGTAGGTGTTTTATTGGTTTTGTGGCTATGAGAGGGAAAAAGAGCAAGAAAAAGTTGCATGAATAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU186001 lncRNA downstream 14546 10298980 ~ 10299177 (-) True CI01000030_10297963_10300335
TU185997 lncRNA downstream 75990 10237639 ~ 10237733 (-) True G163712
TU186575 lncRNA downstream 88835 10222447 ~ 10224888 (-) True G164232
TU186564 lncRNA downstream 102914 10203655 ~ 10210809 (-) True G164224
TU186024 lncRNA downstream 111249 10200596 ~ 10202474 (-) True G163739
TU186606 lncRNA upstream 47355 10367448 ~ 10384031 (-) True G164258
TU186032 lncRNA upstream 101765 10421858 ~ 10429257 (-) True G163747
TU185970 lncRNA upstream 103843 10423936 ~ 10426594 (-) True G163685
TU186042 lncRNA upstream 186701 10506794 ~ 10509132 (-) True G163757
TU186636 lncRNA upstream 196355 10516448 ~ 10516680 (-) True G164284
CI01000030_10297963_10300335.mRNA mRNA downstream 13064 10297472 ~ 10300659 (-) False CI01000030_10297963_10300335
CI01000030_10280046_10287211.mRNA mRNA downstream 26473 10279978 ~ 10287250 (-) False CI01000030_10280046_10287211
CI01000030_10227153_10232109.mRNA mRNA downstream 81087 10227074 ~ 10232636 (-) True CI01000030_10227153_10232109
CI01000030_10189939_10194778.mRNA mRNA downstream 118785 10189777 ~ 10194938 (-) True CI01000030_10189939_10194778
CI01000030_10172789_10173932.mRNA mRNA downstream 139727 10172737 ~ 10173996 (-) True CI01000030_10172789_10173932
CI01000030_10321881_10332415.mRNA mRNA upstream 1778 10321871 ~ 10333450 (-) True CI01000030_10321881_10332415
CI01000030_10343879_10366274.mRNA mRNA upstream 23772 10343865 ~ 10366508 (-) False CI01000030_10343879_10366274
CI01000030_10374567_10392087.mRNA mRNA upstream 53055 10373148 ~ 10393967 (-) False CI01000030_10374567_10392087
CI01000030_10398430_10417482.mRNA mRNA upstream 78032 10398125 ~ 10417687 (-) True CI01000030_10398430_10417482
CI01000030_10443696_10457604.mRNA mRNA upstream 123598 10443691 ~ 10457807 (-) True CI01000030_10443696_10457604
TU186002 other downstream 192003 10121592 ~ 10121720 (-) True G163717
TU186385 other downstream 837459 9475188 ~ 9476264 (-) True G164071
TU185995 other downstream 1011574 9287206 ~ 9302149 (-) True G163710
TU186160 other downstream 1379741 8933413 ~ 8933982 (-) True G163873
TU185749 other downstream 2121237 8192404 ~ 8192486 (-) True G163498
TU186031 other upstream 27267 10392048 ~ 10392179 (-) True CI01000030_10374567_10392087
TU186081 other upstream 45324 10365417 ~ 10366355 (-) True CI01000030_10343879_10366274
TU186808 other upstream 1174245 11512598 ~ 11512682 (-) True G164443

Expression Profile