Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000055_04297863_04299835.mRNA |
| length | 1122 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | CI01000055_04297863_04299835 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000055 |
| NCBI id | null |
| chromosome length | 6774723 |
| location | 4297863 ~ 4300318 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | description |
|---|---|
| K08065 | NFYB, HAP3; nuclear transcription Y subunit beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU272096 | lncRNA | upstream | 15040 | 4282034 ~ 4282823 (+) | True | G239806 |
| TU272095 | lncRNA | upstream | 18289 | 4274970 ~ 4279574 (+) | False | G239806 |
| TU272093 | lncRNA | upstream | 19103 | 4274970 ~ 4278760 (+) | False | G239806 |
| TU272090 | lncRNA | upstream | 23339 | 4274295 ~ 4274524 (+) | True | G239804 |
| TU272089 | lncRNA | upstream | 24448 | 4272996 ~ 4273415 (+) | True | CI01000055_04265119_04272728 |
| TU272119 | lncRNA | downstream | 82372 | 4382690 ~ 4385394 (+) | True | G239827 |
| TU272149 | lncRNA | downstream | 101361 | 4401679 ~ 4401962 (+) | True | G239856 |
| TU272186 | lncRNA | downstream | 177716 | 4478034 ~ 4478303 (+) | True | G239887 |
| TU272188 | lncRNA | downstream | 179121 | 4479439 ~ 4479673 (+) | True | G239889 |
| TU272189 | lncRNA | downstream | 181973 | 4482291 ~ 4482790 (+) | True | G239890 |
| CI01000055_04288760_04295553.mRNA | mRNA | upstream | 2081 | 4288760 ~ 4295782 (+) | True | CI01000055_04288760_04295553 |
| CI01000055_04265119_04272728.mRNA | mRNA | upstream | 23950 | 4265119 ~ 4273913 (+) | False | CI01000055_04265119_04272728 |
| CI01000055_04229735_04231409.mRNA | mRNA | upstream | 66261 | 4229735 ~ 4231602 (+) | True | CI01000055_04229735_04231409 |
| CI01000055_04220373_04228785.mRNA | mRNA | upstream | 68957 | 4220373 ~ 4228906 (+) | True | CI01000055_04220373_04228785 |
| CI01000055_04104413_04124421.mRNA | mRNA | upstream | 173442 | 4104413 ~ 4124421 (+) | True | CI01000055_04104413_04124421 |
| CI01000055_04312501_04314406.mRNA | mRNA | downstream | 12183 | 4312501 ~ 4315015 (+) | True | CI01000055_04312501_04314406 |
| CI01000055_04315348_04320581.mRNA | mRNA | downstream | 14725 | 4315043 ~ 4320581 (+) | True | CI01000055_04315348_04320581 |
| CI01000055_04331311_04334095.mRNA | mRNA | downstream | 30993 | 4331311 ~ 4334250 (+) | True | CI01000055_04331311_04334095 |
| CI01000055_04334410_04337430.mRNA | mRNA | downstream | 33986 | 4334304 ~ 4337430 (+) | True | CI01000055_04334410_04337430 |
| CI01000055_04429659_04441786.mRNA | mRNA | downstream | 129341 | 4429659 ~ 4442531 (+) | True | CI01000055_04429659_04441786 |
| TU272088 | other | upstream | 25148 | 4264027 ~ 4264066 (+) | True | G239802 |
| TU272029 | other | upstream | 42771 | 4254210 ~ 4255092 (+) | True | G239755 |
| TU272036 | other | upstream | 84461 | 4162250 ~ 4213402 (+) | True | G239761 |
| TU271353 | other | upstream | 1753745 | 2541122 ~ 2541235 (+) | True | G239173 |
| TU272472 | other | downstream | 865174 | 5165492 ~ 5166647 (+) | True | CI01000055_05163240_05166231 |
| TU272428 | other | downstream | 1236200 | 5536518 ~ 5543812 (+) | True | G240099 |
| TU272585 | other | downstream | 1314060 | 5614378 ~ 5616353 (+) | False | CI01000055_05614889_05616453 |
| TU272586 | other | downstream | 1314314 | 5614632 ~ 5617591 (+) | True | CI01000055_05614889_05616453 |
| TU272705 | other | downstream | 1786507 | 6086825 ~ 6086887 (+) | True | G240319 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00047939 | False | 1344 | mRNA | 0.41 | 7 | NC_007136.7 | 28823952 ~ 28846945 (+) |
| bowfin (Amia calva) | AMCG00012817 | True | 1150 | mRNA | 0.43 | 6 | CM030125.1 | 9039322 ~ 9043541 (+) |
