RNA id: TU321605


Basic Information

Item Value
RNA id TU321605
length 208
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G283760
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 97223 ~ 97430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGCAAATCTGCTTGATTGTTGAAATCATCACCATATGGAAACTATTGCCCAGCTCTAAACTGCAAAATGTGGATAATTAGGCAATAAGGTATTACAAATATTAATATCATGCATCTCTATAAATCTGCTTTGAAACAATGTGTATTGTGAAAAGCACTGGGGAAAACAAAACAAAGCAAAAACATTGACTTTTAAACCCGCTCTTCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU321557 lncRNA upstream 76626 20382 ~ 20597 (+) True G283715
TU321618 lncRNA downstream 37594 135024 ~ 135223 (+) True G283772
TU321622 lncRNA downstream 41662 139092 ~ 139578 (+) True G283776
TU321624 lncRNA downstream 45059 142489 ~ 142719 (+) True G283777
TU321645 lncRNA downstream 111835 209265 ~ 215233 (+) True G283790
TU321648 lncRNA downstream 124372 221802 ~ 222038 (+) True G283793
CI01000072_00079524_00085764.mRNA mRNA upstream 10747 78303 ~ 86476 (+) True CI01000072_00079524_00085764
CI01000072_00055224_00076836.mRNA mRNA upstream 19868 55178 ~ 77355 (+) True CI01000072_00055224_00076836
CI01000072_00114969_00116445.mRNA mRNA downstream 17501 114931 ~ 116687 (+) True CI01000072_00114969_00116445
CI01000072_00127835_00129847.mRNA mRNA downstream 30325 127755 ~ 130007 (+) True CI01000072_00127835_00129847
CI01000072_00146339_00152728.mRNA mRNA downstream 48909 146339 ~ 153386 (+) True CI01000072_00146339_00152728
CI01000072_00196391_00200157.mRNA mRNA downstream 98961 196391 ~ 200505 (+) True CI01000072_00196391_00200157
CI01000072_00245767_00246460.mRNA mRNA downstream 147014 244444 ~ 246681 (+) True CI01000072_00245767_00246460
TU321805 other downstream 251694 349124 ~ 351288 (+) True CI01000072_00338411_00351144
TU322715 other downstream 1884100 1981530 ~ 1985140 (+) True G284742
TU323494 other downstream 3872827 3970257 ~ 3976214 (+) True G285428
TU324691 other downstream 4071674 4169104 ~ 4172093 (+) False G286470
TU324692 other downstream 4071674 4169104 ~ 4175651 (+) True G286470

Expression Profile