Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00018547 |
| length | 1090 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 7 |
| gene id | XLOC_009442 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007126.7 |
| NCBI id | CM002899.2 |
| chromosome length | 48040578 |
| location | 37831604 ~ 37850969 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-131127-38 | Predicted to enable serine-type endopeptidase activity. Predicted to be involved in proteolysis. Orthologous to human CTRL (chymotrypsin like). |
| ensembl_id | ENSDART00000128922 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00018545 | lncRNA | downstream | 2658 | 37827385 ~ 37829157 (-) | True | XLOC_009441 |
| TCONS_00019219 | lncRNA | downstream | 97940 | 37731055 ~ 37733875 (-) | True | XLOC_009433 |
| TCONS_00018519 | lncRNA | downstream | 567550 | 37259354 ~ 37264265 (-) | True | XLOC_009422 |
| TCONS_00018840 | lncRNA | downstream | 1047042 | 36784479 ~ 36784773 (-) | True | XLOC_009419 |
| TCONS_00019218 | lncRNA | downstream | 1328626 | 36500206 ~ 36503189 (-) | True | XLOC_009416 |
| TCONS_00018553 | lncRNA | upstream | 41078 | 37876716 ~ 37880887 (-) | False | XLOC_009444 |
| TCONS_00018552 | lncRNA | upstream | 41078 | 37876716 ~ 37880887 (-) | True | XLOC_009444 |
| TCONS_00019220 | lncRNA | upstream | 460519 | 38296157 ~ 38297734 (-) | True | XLOC_009453 |
| TCONS_00018841 | lncRNA | upstream | 589910 | 38425548 ~ 38425845 (-) | True | XLOC_009455 |
| TCONS_00019221 | lncRNA | upstream | 712189 | 38547827 ~ 38550804 (-) | True | XLOC_009456 |
| TCONS_00018544 | mRNA | downstream | 2655 | 37820258 ~ 37829160 (-) | False | XLOC_009441 |
| TCONS_00018543 | mRNA | downstream | 24792 | 37806111 ~ 37807023 (-) | True | XLOC_009440 |
| TCONS_00018542 | mRNA | downstream | 32319 | 37795286 ~ 37799496 (-) | True | XLOC_009439 |
| TCONS_00018541 | mRNA | downstream | 51837 | 37778574 ~ 37779978 (-) | True | XLOC_009438 |
| TCONS_00018540 | mRNA | downstream | 57271 | 37773126 ~ 37774544 (-) | True | XLOC_009437 |
| TCONS_00018549 | mRNA | upstream | 278 | 37835916 ~ 37850969 (-) | True | XLOC_009442 |
| TCONS_00018550 | mRNA | upstream | 18845 | 37854483 ~ 37867995 (-) | False | XLOC_009443 |
| TCONS_00018551 | mRNA | upstream | 19695 | 37855333 ~ 37875601 (-) | True | XLOC_009443 |
| TCONS_00018554 | mRNA | upstream | 55407 | 37891045 ~ 37921998 (-) | False | XLOC_009445 |
| TCONS_00018555 | mRNA | upstream | 71668 | 37907306 ~ 37921702 (-) | False | XLOC_009445 |
| TCONS_00018535 | other | downstream | 102649 | 37727834 ~ 37729166 (-) | True | XLOC_009432 |
| TCONS_00018517 | other | downstream | 957449 | 36874251 ~ 36874366 (-) | True | XLOC_009420 |
| TCONS_00018513 | other | downstream | 1298568 | 36529465 ~ 36533247 (-) | True | XLOC_009417 |
| TCONS_00018488 | other | downstream | 2619578 | 35167295 ~ 35212237 (-) | True | XLOC_009400 |
| TCONS_00018481 | other | downstream | 2719029 | 35095205 ~ 35112786 (-) | False | XLOC_009398 |
| TCONS_00018590 | other | upstream | 2233373 | 40069011 ~ 40069127 (-) | True | XLOC_009467 |
| TCONS_00018622 | other | upstream | 3557763 | 41393401 ~ 41396073 (-) | True | XLOC_009478 |
| TCONS_00018633 | other | upstream | 3693622 | 41529260 ~ 41543440 (-) | True | XLOC_009482 |
| TCONS_00018660 | other | upstream | 4442035 | 42277673 ~ 42283815 (-) | True | XLOC_009502 |
| TCONS_00018661 | other | upstream | 4693152 | 42528790 ~ 42528904 (-) | True | XLOC_009503 |
