Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01180000_07655737_07662839.mRNA |
| length | 3077 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 19 |
| gene id | CI01180000_07655737_07662839 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 7654823 ~ 7662932 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0032389 | MutLalpha complex | cellular_component |
| id | description |
|---|---|
| K08734 | MLH1; DNA mismatch repair protein MLH1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU803019 | lncRNA | upstream | 6883 | 7647690 ~ 7647940 (+) | True | G681993 |
| TU803018 | lncRNA | upstream | 7449 | 7647157 ~ 7647374 (+) | True | G681992 |
| TU803017 | lncRNA | upstream | 7787 | 7646815 ~ 7647036 (+) | True | G681991 |
| TU803016 | lncRNA | upstream | 8671 | 7645821 ~ 7646152 (+) | True | G681990 |
| TU802877 | lncRNA | upstream | 23669 | 7629096 ~ 7629573 (+) | True | G681852 |
| TU802835 | lncRNA | downstream | 24395 | 7687327 ~ 7713392 (+) | True | G681823 |
| TU802816 | lncRNA | downstream | 63528 | 7726460 ~ 7728061 (+) | True | G681819 |
| TU803079 | lncRNA | downstream | 210024 | 7872956 ~ 7873231 (+) | True | G682050 |
| TU803080 | lncRNA | downstream | 218909 | 7881841 ~ 7882139 (+) | True | G682051 |
| TU803082 | lncRNA | downstream | 221957 | 7884889 ~ 7885102 (+) | True | G682053 |
| CI01180000_07630010_07630436.mRNA | mRNA | upstream | 23907 | 7629585 ~ 7630916 (+) | False | CI01180000_07630010_07630436 |
| CI01180000_07558791_07591349.mRNA | mRNA | upstream | 62931 | 7558791 ~ 7591892 (+) | True | CI01180000_07558791_07591349 |
| CI01180000_07508387_07529689.mRNA | mRNA | upstream | 124526 | 7508069 ~ 7530297 (+) | True | CI01180000_07508387_07529689 |
| CI01180000_07472651_07489000.mRNA | mRNA | upstream | 165474 | 7470005 ~ 7489349 (+) | True | CI01180000_07472651_07489000 |
| CI01180000_07431871_07436446.mRNA | mRNA | upstream | 218198 | 7430824 ~ 7436625 (+) | True | CI01180000_07431871_07436446 |
| CI01180000_07694615_07695428.mRNA | mRNA | downstream | 31597 | 7694529 ~ 7695546 (+) | False | CI01180000_07694615_07695428 |
| CI01180000_07802968_07887251.mRNA | mRNA | downstream | 140036 | 7802968 ~ 7887251 (+) | True | CI01180000_07802968_07887251 |
| CI01180000_07939719_07956224.mRNA | mRNA | downstream | 276260 | 7939192 ~ 7957335 (+) | True | CI01180000_07939719_07956224 |
| CI01180000_08012978_08021101.mRNA | mRNA | downstream | 350046 | 8012978 ~ 8021401 (+) | True | CI01180000_08012978_08021101 |
| CI01180000_08028837_08040090.mRNA | mRNA | downstream | 365905 | 8028837 ~ 8040604 (+) | True | CI01180000_08028837_08040090 |
| TU802812 | other | upstream | 185218 | 7403147 ~ 7469605 (+) | True | G681817 |
| TU802641 | other | upstream | 995277 | 6655846 ~ 6659546 (+) | True | G681667 |
| TU802663 | other | upstream | 1019834 | 6632908 ~ 6634989 (+) | True | G681686 |
| TU802553 | other | upstream | 1175824 | 6473035 ~ 6478999 (+) | True | G681592 |
| TU802202 | other | upstream | 2281061 | 5370410 ~ 5373762 (+) | True | G681268 |
| TU802830 | other | downstream | 491 | 7663423 ~ 7694381 (+) | True | G681822 |
| TU802826 | other | downstream | 31391 | 7694323 ~ 7694381 (+) | True | G681822 |
| TU803281 | other | downstream | 705253 | 8368185 ~ 8368935 (+) | True | G682232 |
| TU803553 | other | downstream | 1373485 | 9036417 ~ 9038892 (+) | True | CI01180000_09036547_09038313 |
| TU806595 | other | downstream | 3157054 | 10819986 ~ 10866176 (+) | True | G685188 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00012192 | False | 2318 | mRNA | 0.47 | 20 | NC_007124.7 | 42602406 ~ 42617639 (+) |
