RNA id: TCONS_00001924


Basic Information

Item Value
RNA id TCONS_00001924
length 566
RNA type mRNA
GC content 0.40
exon number 2
gene id XLOC_001200
representative False

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 21721651 ~ 21723360 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAGGCCGCGGTCCAGCTTCCGGTCTGGGTGATTTTAAGCGGAGGTAAACAGTATTATGGCAGAGTCGTCAATATTTACTCGCTGTTTGCGAGTAAATTATGGTCAACGATGTGCAAATGCTTGTCCCGATGTGCTCTACAACACCGCAGAGCAAAGCTTGAGAAAGGTTTCAAGTTTTATGCATCTTCCTACCTGTGCAATTATGAAGGTAACATTATGAGATTCAGAGCTAGAAAATTTTATATGTTACTTCATCCTGGAGCGGACATCCGTCAGAAGATCCATGCCATCGTCTGCTAGTTAATAGCTCCTGCTCTTGTGTGGCTGAGAGtgggatatgcaaacatttggttgctttgcttttccagacagcccattactctgaaatgtgtaatgtgtgttgtcACATGAACAATTGTTTGGAATGGATCAATTATGTGTTAAGTTCTATGAAACAGaggggtgatttatttatttatttaatacgcATCAGCCCAAATACCTCTCTATGCACAAGTTACAGAAAAAGCACCTGATTCAAGAAAACAACTGATTCaatgtcatta

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137138

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00001920 lncRNA downstream 163238 21556544 ~ 21558413 (-) True XLOC_001196
TCONS_00001908 lncRNA downstream 400216 21320823 ~ 21321435 (-) True XLOC_001192
TCONS_00001904 lncRNA downstream 560240 21160650 ~ 21161411 (-) True XLOC_001190
TCONS_00001898 lncRNA downstream 705721 21010689 ~ 21015930 (-) False XLOC_001189
TCONS_00001895 lncRNA downstream 715718 21000784 ~ 21005933 (-) False XLOC_001188
TCONS_00001926 lncRNA upstream 156926 21880255 ~ 21881768 (-) True XLOC_001201
TCONS_00003411 lncRNA upstream 276452 21999781 ~ 22001050 (-) True XLOC_001204
TCONS_00001938 lncRNA upstream 928250 22651579 ~ 22652026 (-) True XLOC_001210
TCONS_00001950 lncRNA upstream 1121960 22845289 ~ 22851419 (-) True XLOC_001217
TCONS_00001960 lncRNA upstream 1544015 23267344 ~ 23268528 (-) False XLOC_001220
TCONS_00001922 mRNA downstream 7626 21610471 ~ 21714025 (-) True XLOC_001198
TCONS_00001921 mRNA downstream 122432 21576674 ~ 21599219 (-) True XLOC_001197
TCONS_00001919 mRNA downstream 158611 21540453 ~ 21563040 (-) False XLOC_001196
TCONS_00001915 mRNA downstream 183322 21516481 ~ 21538329 (-) False XLOC_001195
TCONS_00001925 mRNA upstream 138058 21861387 ~ 21881818 (-) False XLOC_001201
TCONS_00001927 mRNA upstream 169960 21893289 ~ 21901589 (-) True XLOC_001202
TCONS_00001928 mRNA upstream 181626 21904955 ~ 21909608 (-) True XLOC_001203
TCONS_00001930 mRNA upstream 513160 22236489 ~ 22338521 (-) False XLOC_001206
TCONS_00001931 mRNA upstream 560297 22283626 ~ 22370660 (-) True XLOC_001206
TCONS_00001923 other downstream 41173 21680364 ~ 21680478 (-) True XLOC_001199
TCONS_00001916 other downstream 194280 21526672 ~ 21527371 (-) False XLOC_001195
TCONS_00001899 other downstream 708437 21011062 ~ 21013214 (-) True XLOC_001189
TCONS_00001897 other downstream 708809 21010689 ~ 21012842 (-) False XLOC_001189
TCONS_00001896 other downstream 718342 21001157 ~ 21003309 (-) True XLOC_001188
TCONS_00001929 other upstream 468623 22191952 ~ 22192067 (-) True XLOC_001205
TCONS_00001939 other upstream 940394 22663723 ~ 22674613 (-) True XLOC_001211
TCONS_00001973 other upstream 1599673 23323002 ~ 23330066 (-) False XLOC_001223
TCONS_00001976 other upstream 1616635 23339964 ~ 23340503 (-) False XLOC_001223
TCONS_00001977 other upstream 1617642 23340971 ~ 23341690 (-) False XLOC_001223

Expression Profile

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