Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00025376 |
| length | 1044 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 4 |
| gene id | XLOC_012708 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 16940440 ~ 16950781 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-141216-349 | Orthologous to human C11orf16 (chromosome 11 open reading frame 16). |
| ensembl_id | ENSDART00000157609 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00026886 | lncRNA | upstream | 2064 | 16941462 ~ 16941847 (+) | True | XLOC_012709 |
| TCONS_00027079 | lncRNA | upstream | 81492 | 16798755 ~ 16862419 (+) | False | XLOC_012707 |
| TCONS_00027080 | lncRNA | upstream | 107846 | 16799055 ~ 16836065 (+) | True | XLOC_012707 |
| TCONS_00027078 | lncRNA | upstream | 628100 | 16310121 ~ 16315811 (+) | True | XLOC_012700 |
| TCONS_00025361 | lncRNA | upstream | 750114 | 16192118 ~ 16193797 (+) | True | XLOC_012698 |
| TCONS_00027081 | lncRNA | downstream | 35547 | 16986090 ~ 16988214 (+) | False | XLOC_012712 |
| TCONS_00027082 | lncRNA | downstream | 227950 | 17178493 ~ 17180077 (+) | True | XLOC_012716 |
| TCONS_00027083 | lncRNA | downstream | 523432 | 17473975 ~ 17483224 (+) | True | XLOC_012719 |
| TCONS_00027084 | lncRNA | downstream | 525832 | 17476375 ~ 17476883 (+) | True | XLOC_012720 |
| TCONS_00025404 | lncRNA | downstream | 632940 | 17583483 ~ 17585751 (+) | True | XLOC_012724 |
| TCONS_00025373 | mRNA | upstream | 187767 | 16749091 ~ 16756144 (+) | False | XLOC_012706 |
| TCONS_00025374 | mRNA | upstream | 191049 | 16750080 ~ 16752862 (+) | True | XLOC_012706 |
| TCONS_00025371 | mRNA | upstream | 195235 | 16744307 ~ 16748676 (+) | False | XLOC_012705 |
| TCONS_00025372 | mRNA | upstream | 196523 | 16744313 ~ 16747388 (+) | True | XLOC_012705 |
| TCONS_00025368 | mRNA | upstream | 218824 | 16717764 ~ 16725087 (+) | False | XLOC_012703 |
| TCONS_00025377 | mRNA | downstream | 10423 | 16960966 ~ 16971684 (+) | False | XLOC_012710 |
| TCONS_00025378 | mRNA | downstream | 10428 | 16960971 ~ 16971684 (+) | False | XLOC_012710 |
| TCONS_00025379 | mRNA | downstream | 13338 | 16963881 ~ 16967042 (+) | True | XLOC_012710 |
| TCONS_00025383 | mRNA | downstream | 35952 | 16986495 ~ 16987206 (+) | False | XLOC_012712 |
| TCONS_00025384 | mRNA | downstream | 36360 | 16986903 ~ 16989717 (+) | True | XLOC_012712 |
| TCONS_00025369 | other | upstream | 221929 | 16721799 ~ 16721982 (+) | True | XLOC_012704 |
| TCONS_00025367 | other | upstream | 224721 | 16715951 ~ 16719190 (+) | False | XLOC_012703 |
| TCONS_00025358 | other | upstream | 803563 | 16133684 ~ 16140348 (+) | False | XLOC_012697 |
| TCONS_00025343 | other | upstream | 1231366 | 15712429 ~ 15712545 (+) | True | XLOC_012689 |
| TCONS_00025333 | other | upstream | 1947206 | 14989079 ~ 14996705 (+) | True | XLOC_012675 |
| TCONS_00025380 | other | downstream | 28085 | 16978628 ~ 16983066 (+) | False | XLOC_012711 |
| TCONS_00025381 | other | downstream | 28173 | 16978716 ~ 16983066 (+) | False | XLOC_012711 |
| TCONS_00025382 | other | downstream | 29022 | 16979565 ~ 16983066 (+) | True | XLOC_012711 |
| TCONS_00025387 | other | downstream | 121532 | 17072075 ~ 17074021 (+) | True | XLOC_012714 |
| TCONS_00025397 | other | downstream | 586768 | 17537311 ~ 17566512 (+) | False | XLOC_012723 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000013_05928871_05930892.mRNA | True | 907 | mRNA | 0.46 | 3 | CI01000013 | 5928723 ~ 5930892 (-) |
