RNA id: TCONS_00025759


Basic Information

Item Value
RNA id TCONS_00025759
length 1575
RNA type mRNA
GC content 0.49
exon number 2
gene id XLOC_012925
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 33779440 ~ 33796526 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGCATAAAGAAGATGCTGACTTTAACATCTTGTTAGCCACTGACTCCTACAAGGTGACACATTACAACCAATACCCGCCCAACACTAGTAAGATGTACTCTTACTTTGAGTGCCGTGAGAAGAAGGCCAACCCCAACAAACCCAGGAAAATCAGATATGACACGACGGTCTTCTATGGACTTCAGTATGTTCTCCACAAGTACTTTAAAGGACAGGTCGTCACTCTGGAGAAGATTCAGGAAGCAAAGGAAGTGTACCGGGAACACTTTCATGACGACATGTTCAATGAGAAAGGATGGAATTACATTCTGGAGAAGTACAACGGCCATCTGCCTATCGAGATCAAGGCTGTGCCAGAGGGAAGTGTAATCCCGCGTGGAAACGTGCTATTCACTGTGGAAAACACAGATGATGAGTGCTACTGGCTGACTAACTGGATAGAGACAATTCTTCTGCAGATCTGGTATCCTATCACTGTCGCGACCAACTCGCGAGAGCAAAAGAAGATTCTGGCCAAATATCTGATGGAAACCTCTGGAAGCCTGGACGGGCTTGAATATAAGCTGCACGATTTCGGCTACAGAGGAGTTTCATCTCAGGAAACAGCTGGAATCGGTGGATCTGCACACTTGGTGAACTTCAAAGGAACAGACACCATGGCTGGGATCAGACTCATCAAGAAATATTACGGCACTAAAGAGCCAGTTGCTGGTTTCTCGGTGCCAGCCGCAGAGCACAGCACAATCACAGCCTGGGGAAAGGACCACGAGAAGGACGCTTTTGAACACATTGTCAGGATGTTCCCATccgtccctgtatctgtggtcaGTGACAGCTACGACATCTACAATGCCTGCGAGAAGATCTGGGGCGAAGAACTGAGGTCTCTGGTGGAGATGCGTAGCGCTGACGCCCCGCTGGTGGTCCGACCCGATTCAGGAGACCCTCTAGAAACAGTTCTGAGAGTGCTCGAGATCCTAGGAGAGAAGTTCCCTCCGCTCGAGAACTCCAAAGGCTATAAGGTGCTGCCCCCCTACATCAGAGTCATCCAGGGGGATGGCATCGACATAGACTCTTTACAGGACATCTTAGAGGGCATAAAAAAGCACGGATGGAGCATTGAGAACATCGGCTTTGGTTCAGGAGGAGCTTTGCTGCAGAAACTGAACCGAGATATGCTCAGCTGCTGCTTTAAGTGCAGTTATGCGGTGACGAACGGGGTGCCCATAAACGTCTTTAAAGACCCCATTGCAGACCCCACTAAAAAGTCAAAGAAAGGCCGGCTTTCCCTTCACAGGACACCCAGTGGAAGTCTGGTGACACTGGAAGAGGGAAGCGGCAGTCTGGGGGAGTACGGAGAAGACTTGCTCCAGACTGTGTTTAGGAATGGGAAGATCATAAAGACGTACACCTTCAATGAGGTCAGAGAAAATGCGGAGCTGAAGGAGAGTGAATTGTGTCCCTCTGAGCAGTTCCCATCATCCCCTTCTTCACCACACTGCTCACAGACCCgagcacacacacaacatgcagAAACAGGTGAGACTTACACAACATTTTTCACTAAATCATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000193991

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00025753 lncRNA upstream 44493 33735335 ~ 33747115 (+) True XLOC_012923
TCONS_00026915 lncRNA upstream 61716 33725576 ~ 33729892 (+) False XLOC_012922
TCONS_00025747 lncRNA upstream 164758 33623312 ~ 33626850 (+) False XLOC_012918
TCONS_00027129 lncRNA upstream 164758 33623742 ~ 33626850 (+) True XLOC_012918
TCONS_00027128 lncRNA upstream 623517 33165613 ~ 33168091 (+) True XLOC_012896
TCONS_00027130 lncRNA downstream 233113 34028272 ~ 34048667 (+) True XLOC_012928
TCONS_00026916 lncRNA downstream 391923 34187082 ~ 34194374 (+) False XLOC_012929
TCONS_00026917 lncRNA downstream 394161 34189320 ~ 34194374 (+) True XLOC_012929
TCONS_00027131 lncRNA downstream 1147569 34942728 ~ 35038409 (+) False XLOC_012935
TCONS_00027132 lncRNA downstream 1223173 35018332 ~ 35038409 (+) False XLOC_012935
TCONS_00025756 mRNA upstream 8604 33780102 ~ 33783004 (+) False XLOC_012925
TCONS_00025755 mRNA upstream 9186 33779440 ~ 33782422 (+) False XLOC_012925
TCONS_00025754 mRNA upstream 24695 33762090 ~ 33766913 (+) True XLOC_012924
TCONS_00025752 mRNA upstream 59993 33725576 ~ 33731615 (+) True XLOC_012922
TCONS_00025751 mRNA upstream 103153 33685150 ~ 33688455 (+) True XLOC_012921
TCONS_00025760 mRNA downstream 23418 33818577 ~ 33821891 (+) True XLOC_012926
TCONS_00025761 mRNA downstream 119009 33914168 ~ 33918356 (+) True XLOC_012927
TCONS_00025762 mRNA downstream 386496 34181655 ~ 34195744 (+) False XLOC_012929
TCONS_00025763 mRNA downstream 386518 34181677 ~ 34216886 (+) False XLOC_012929
TCONS_00025764 mRNA downstream 430361 34225520 ~ 34242558 (+) True XLOC_012930
TCONS_00025746 other upstream 164758 33622917 ~ 33626850 (+) False XLOC_012918
TCONS_00025732 other upstream 347351 33443264 ~ 33444257 (+) True XLOC_012909
TCONS_00025687 other upstream 1702664 32084939 ~ 32088944 (+) True XLOC_012873
TCONS_00025679 other upstream 1945052 31845504 ~ 31846556 (+) True XLOC_012868
TCONS_00025666 other upstream 2785550 30998626 ~ 31006058 (+) False XLOC_012861
TCONS_00025772 other downstream 1277817 35072976 ~ 35074623 (+) False XLOC_012936
TCONS_00025779 other downstream 1378713 35173872 ~ 35176134 (+) True XLOC_012939
TCONS_00025784 other downstream 2011689 35806848 ~ 35806966 (+) True XLOC_012944
TCONS_00025785 other downstream 2024290 35819449 ~ 35819563 (+) True XLOC_012945
TCONS_00025791 other downstream 2346074 36141233 ~ 36142754 (+) False XLOC_012949

Expression Profile

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