Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU49010 |
| length | 237 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G43685 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 40483284 ~ 40483520 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48998 | lncRNA | downstream | 9587 | 40473481 ~ 40473697 (-) | True | G43673 |
| TU48955 | lncRNA | downstream | 19645 | 40463046 ~ 40463639 (-) | True | G43632 |
| TU48951 | lncRNA | downstream | 101696 | 40380309 ~ 40381588 (-) | True | G43628 |
| TU48684 | lncRNA | downstream | 268746 | 40214322 ~ 40214538 (-) | True | G43369 |
| TU48672 | lncRNA | downstream | 274177 | 40208883 ~ 40209107 (-) | True | G43357 |
| TU49349 | lncRNA | upstream | 10764 | 40494284 ~ 40494515 (-) | True | G44006 |
| TU49431 | lncRNA | upstream | 121591 | 40605111 ~ 40646515 (-) | True | G44076 |
| TU49519 | lncRNA | upstream | 303201 | 40786721 ~ 40787377 (-) | True | G44160 |
| TU49518 | lncRNA | upstream | 366182 | 40849702 ~ 40858845 (-) | True | nudt4a |
| TU49571 | lncRNA | upstream | 375733 | 40859253 ~ 40859577 (-) | True | G44204 |
| trnar-ucg | mRNA | downstream | 741799 | 39741413 ~ 39741485 (-) | True | trnar-ucg |
| XR_002473343.2 | mRNA | downstream | 747344 | 39718042 ~ 39735940 (-) | False | LOC110522570 |
| XR_002473340.2 | mRNA | downstream | 749666 | 39718042 ~ 39733618 (-) | False | LOC110522570 |
| XM_021601007.2 | mRNA | downstream | 864616 | 39596545 ~ 39618668 (-) | True | LOC110522551 |
| XM_021600996.2 | mRNA | downstream | 900101 | 39580837 ~ 39583183 (-) | True | LOC110522541 |
| XM_021601102.2 | mRNA | upstream | 13861 | 40497381 ~ 40513880 (-) | False | kras |
| XM_021601094.2 | mRNA | upstream | 13861 | 40497381 ~ 40513885 (-) | True | kras |
| XM_021601141.2 | mRNA | upstream | 81799 | 40565319 ~ 40568730 (-) | True | bhlhe41 |
| XM_036977393.1 | mRNA | upstream | 106572 | 40590092 ~ 40750790 (-) | False | LOC110522681 |
| XM_036977399.1 | mRNA | upstream | 106572 | 40590092 ~ 40750790 (-) | True | LOC110522681 |
| TU47067 | other | downstream | 1461259 | 39021805 ~ 39022025 (-) | True | G41868 |
| TU45924 | other | downstream | 2291548 | 38187488 ~ 38191736 (-) | True | G40768 |
| TU45886 | other | downstream | 2357559 | 38125280 ~ 38125725 (-) | True | G40732 |
| TU45214 | other | downstream | 2766251 | 37716540 ~ 37717033 (-) | True | G40079 |
| TU43930 | other | downstream | 3972455 | 36508538 ~ 36510829 (-) | True | G38855 |
| TU52237 | other | upstream | 2555208 | 43038728 ~ 43129029 (-) | True | tspan9a |
| TU55610 | other | upstream | 5237285 | 45720805 ~ 45721124 (-) | True | G49774 |
| TU55801 | other | upstream | 5465438 | 45948958 ~ 45949951 (-) | True | G49962 |
| TU57229 | other | upstream | 6581254 | 47064774 ~ 47119033 (-) | False | G51214 |
| TU57327 | other | upstream | 6805419 | 47288939 ~ 47289681 (-) | True | G51285 |
