RNA id: TCONS_00026752


Basic Information

Item Value
RNA id TCONS_00026752
length 1264
RNA type mRNA
GC content 0.44
exon number 6
gene id XLOC_013609
representative True

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 44281623 ~ 44285539 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tgagaactGTTCAAGGCCATGGCAAAAtctaagaaatattttaaataggagGCAGCACGCATATATCCTGCTGAAAACACACTGTaggttttttaaatgtatgttttagtgCTGCATATAGTGCATTTTACCcttacaaacacacaatacaaTGCATTTGTGCAAACCTCTAAATATATCAAGATGCACAGAATAATTTTAACATAAAAGTGCATTTGgcctatatatactgtacatattacGTACtgacataacagatatccatcaGAGCCCATCTTCCTCTTTTAAAGAGAAATGTTCAAATATCTAAAACGTCCCAATAACTGCATTTGTTTGATCTGTTTTCAGACTACATCCTCAGCCACTACCAGCTTGGCAGAGAGCTGGGAGTCGGTGGATTTGGTGTGGTGTATCAAGCGAAGCGTTTGGAGGACAATCTCAGTGTGGCAGTGAAATATGTCAACAAGAACGCCGACCACTTGAAAACATATTATCATCCAGAGGGAAGGAGACTTCCATTGGAGATTGTCCTCACGCTGATGGCGAATGAAGGGGGCAGTAACCCGGAGATCATCCAGCTGCTGGACTGGAAGGACTACAGTGACCATTTCGTCATGATTTTTGAGTATCCCGCTCCCTGTCAGGATCTGGAGGACTACATGAAGGATCGTGGGGATAAAATCAGTGAGGGTTTGGCTAAGATAGTCATGAGGCAGGTGATTCAGGCTATCCTGGTGTGCTGCCAGCGCAAGGTTTTCCATCGCGACCTCAAACCCTCCAACCTCCTCATCAACATCAGGACACTCCAGGTCAAACTCATTGACTTTGGGTGCGGTGACGTTTTGAGGGACTCCTACTACAGGACCTACTGTGGCACAATATTTTACCTTCCTCCTGAGTTCTTGTACCATGGGGTATACCACGCCAATCCTGCCACAGTGTGGTCTCTGGGGATTCTGCTGTTCAGAATGGTGAGCGGAAGATATCCGTTCTTCTTCACATTGCTGTGGATCCGGTGGAAAATCTGGCACAAAAGACACCTGTCAAAGGAACTGCTCCAACTTCTCCATGAGCTCCTCGTGGTAAACCCAGAGAAACGGATGAATCTGAAGGACATCCTTTCCCACAGCTGGTTTACGgAAAGCGAATGACCAATTCAGAAGTAGAGTTTATCTTCAGATTTACATCTTTTGGGCTGAATGAACGACATCTTGCTAAACATTTTCCAATTGTGTGTTTTGTATATACTCTGTGCAATTTATTG

Function

GO:

id name namespace
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050419-252 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

Ensembl:

ensembl_id ENSDART00000137222

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00027407 lncRNA downstream 22963 44257757 ~ 44258660 (-) True XLOC_013608
TCONS_00027406 lncRNA downstream 387488 43892837 ~ 43894135 (-) True XLOC_013605
TCONS_00027405 lncRNA downstream 634190 43615707 ~ 43647433 (-) True XLOC_013603
TCONS_00027404 lncRNA downstream 688711 43589544 ~ 43592912 (-) True XLOC_013602
TCONS_00027403 lncRNA downstream 831282 43447319 ~ 43450341 (-) True XLOC_013601
TCONS_00027408 lncRNA upstream 311255 44596794 ~ 44606376 (-) False XLOC_013613
TCONS_00027409 lncRNA upstream 311255 44596794 ~ 44606783 (-) False XLOC_013613
TCONS_00027410 lncRNA upstream 346032 44631571 ~ 44634146 (-) True XLOC_013615
TCONS_00027411 lncRNA upstream 358613 44644152 ~ 44647011 (-) True XLOC_013616
TCONS_00027412 lncRNA upstream 1228425 45513964 ~ 45522215 (-) True XLOC_013620
TCONS_00026750 mRNA downstream 152472 44053052 ~ 44129151 (-) False XLOC_013607
TCONS_00026748 mRNA downstream 287989 43896153 ~ 43993634 (-) False XLOC_013606
TCONS_00026749 mRNA downstream 288009 43896171 ~ 43993614 (-) True XLOC_013606
TCONS_00026747 mRNA downstream 397579 43867183 ~ 43884044 (-) True XLOC_013604
TCONS_00026746 mRNA downstream 401603 43865901 ~ 43880020 (-) False XLOC_013604
TCONS_00026753 mRNA upstream 17614 44303153 ~ 44316920 (-) True XLOC_013610
TCONS_00026754 mRNA upstream 34475 44320014 ~ 44356656 (-) False XLOC_013611
TCONS_00026755 mRNA upstream 35381 44320920 ~ 44359726 (-) False XLOC_013611
TCONS_00026756 mRNA upstream 36816 44322355 ~ 44331041 (-) True XLOC_013611
TCONS_00026757 mRNA upstream 78991 44364530 ~ 44526940 (-) False XLOC_013612
TCONS_00026751 other downstream 208195 44065033 ~ 44073428 (-) True XLOC_013607
TCONS_00026709 other downstream 3573099 40702788 ~ 40708524 (-) True XLOC_013577
TCONS_00026696 other downstream 4665718 39615775 ~ 39615905 (-) True XLOC_013566
TCONS_00026695 other downstream 4694958 39586546 ~ 39586665 (-) True XLOC_013565
TCONS_00026691 other downstream 5093222 39186174 ~ 39188401 (-) True XLOC_013560
TCONS_00026761 other upstream 314267 44599806 ~ 44611252 (-) True XLOC_013613
TCONS_00026763 other upstream 330462 44616001 ~ 44623595 (-) True XLOC_013614
TCONS_00026769 other upstream 1334019 45619558 ~ 45645302 (-) True XLOC_013622
TCONS_00026799 other upstream 3218238 47503777 ~ 47503894 (-) True XLOC_013649

Expression Profile

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