Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162231 |
| length | 325 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G141138 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39555958 ~ 39556282 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162174 | lncRNA | downstream | 5409 | 39516522 ~ 39550549 (-) | True | G141108 |
| TU162144 | lncRNA | downstream | 85198 | 39470402 ~ 39470760 (-) | True | G141091 |
| TU162143 | lncRNA | downstream | 86082 | 39469660 ~ 39469876 (-) | True | G141090 |
| TU162135 | lncRNA | downstream | 128179 | 39427547 ~ 39427779 (-) | True | G141082 |
| TU162133 | lncRNA | downstream | 129524 | 39422834 ~ 39426434 (-) | True | G141081 |
| TU162240 | lncRNA | upstream | 4642 | 39560924 ~ 39561351 (-) | True | G141147 |
| TU162457 | lncRNA | upstream | 162715 | 39718997 ~ 39719255 (-) | True | G141338 |
| TU162471 | lncRNA | upstream | 186106 | 39742388 ~ 39742618 (-) | True | G141352 |
| TU162477 | lncRNA | upstream | 204756 | 39761038 ~ 39761262 (-) | True | G141358 |
| TU162479 | lncRNA | upstream | 205988 | 39762270 ~ 39762531 (-) | True | G141360 |
| XM_021562336.2 | mRNA | downstream | 525 | 39553803 ~ 39555433 (-) | True | nr0b2a |
| XM_036948182.1 | mRNA | downstream | 54470 | 39499737 ~ 39501488 (-) | True | LOC118940039 |
| LOC110501545 | mRNA | downstream | 58397 | 39487555 ~ 39497561 (-) | True | LOC110501545 |
| XM_021562210.2 | mRNA | downstream | 90352 | 39449495 ~ 39465606 (-) | True | si:ch211-154o6.3 |
| XM_021562215.2 | mRNA | downstream | 90380 | 39449495 ~ 39465578 (-) | False | si:ch211-154o6.3 |
| LOC110489623 | mRNA | upstream | 257841 | 39814123 ~ 39821845 (-) | True | LOC110489623 |
| XM_036948238.1 | mRNA | upstream | 447488 | 40003770 ~ 40078999 (-) | True | LOC110489634 |
| XM_036948285.1 | mRNA | upstream | 668791 | 40225073 ~ 40298251 (-) | False | LOC110489653 |
| XM_036948297.1 | mRNA | upstream | 668791 | 40225073 ~ 40298251 (-) | False | LOC110489653 |
| XM_036948273.1 | mRNA | upstream | 668791 | 40225073 ~ 40298260 (-) | False | LOC110489653 |
| TU161916 | other | downstream | 491540 | 39063862 ~ 39064418 (-) | True | G140879 |
| TU161480 | other | downstream | 727763 | 38827909 ~ 38828195 (-) | True | G140479 |
| TU160233 | other | downstream | 1507292 | 38046702 ~ 38048666 (-) | False | LOC110489105 |
| TU160231 | other | downstream | 1507611 | 38046702 ~ 38048347 (-) | False | LOC110489105 |
| TU162487 | other | upstream | 207651 | 39763933 ~ 39765170 (-) | False | G141363 |
| TU162488 | other | upstream | 207651 | 39763933 ~ 39765423 (-) | False | G141363 |
| TU162490 | other | upstream | 208225 | 39764507 ~ 39765170 (-) | False | G141363 |
| TU162491 | other | upstream | 208225 | 39764507 ~ 39765473 (-) | True | G141363 |
| TU163223 | other | upstream | 668340 | 40224622 ~ 40241404 (-) | False | LOC110489653 |
