Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162471 |
| length | 231 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G141352 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 39742388 ~ 39742618 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162457 | lncRNA | downstream | 23133 | 39718997 ~ 39719255 (-) | True | G141338 |
| TU162240 | lncRNA | downstream | 181037 | 39560924 ~ 39561351 (-) | True | G141147 |
| TU162231 | lncRNA | downstream | 186106 | 39555958 ~ 39556282 (-) | True | G141138 |
| TU162174 | lncRNA | downstream | 191839 | 39516522 ~ 39550549 (-) | True | G141108 |
| TU162144 | lncRNA | downstream | 271628 | 39470402 ~ 39470760 (-) | True | G141091 |
| TU162477 | lncRNA | upstream | 18420 | 39761038 ~ 39761262 (-) | True | G141358 |
| TU162479 | lncRNA | upstream | 19652 | 39762270 ~ 39762531 (-) | True | G141360 |
| TU162489 | lncRNA | upstream | 21315 | 39763933 ~ 39765473 (-) | False | G141363 |
| TU162481 | lncRNA | upstream | 22938 | 39765556 ~ 39766347 (-) | False | G141362 |
| TU162485 | lncRNA | upstream | 22982 | 39765600 ~ 39766347 (-) | False | G141362 |
| XM_021562336.2 | mRNA | downstream | 186955 | 39553803 ~ 39555433 (-) | True | nr0b2a |
| XM_036948182.1 | mRNA | downstream | 240900 | 39499737 ~ 39501488 (-) | True | LOC118940039 |
| LOC110501545 | mRNA | downstream | 244827 | 39487555 ~ 39497561 (-) | True | LOC110501545 |
| XM_021562210.2 | mRNA | downstream | 276782 | 39449495 ~ 39465606 (-) | True | si:ch211-154o6.3 |
| XM_021562215.2 | mRNA | downstream | 276810 | 39449495 ~ 39465578 (-) | False | si:ch211-154o6.3 |
| LOC110489623 | mRNA | upstream | 71505 | 39814123 ~ 39821845 (-) | True | LOC110489623 |
| XM_036948238.1 | mRNA | upstream | 261152 | 40003770 ~ 40078999 (-) | True | LOC110489634 |
| XM_036948285.1 | mRNA | upstream | 482455 | 40225073 ~ 40298251 (-) | False | LOC110489653 |
| XM_036948297.1 | mRNA | upstream | 482455 | 40225073 ~ 40298251 (-) | False | LOC110489653 |
| XM_036948273.1 | mRNA | upstream | 482455 | 40225073 ~ 40298260 (-) | False | LOC110489653 |
| TU161916 | other | downstream | 677970 | 39063862 ~ 39064418 (-) | True | G140879 |
| TU161480 | other | downstream | 914193 | 38827909 ~ 38828195 (-) | True | G140479 |
| TU160233 | other | downstream | 1693722 | 38046702 ~ 38048666 (-) | False | LOC110489105 |
| TU160231 | other | downstream | 1694041 | 38046702 ~ 38048347 (-) | False | LOC110489105 |
| TU162487 | other | upstream | 21315 | 39763933 ~ 39765170 (-) | False | G141363 |
| TU162488 | other | upstream | 21315 | 39763933 ~ 39765423 (-) | False | G141363 |
| TU162490 | other | upstream | 21889 | 39764507 ~ 39765170 (-) | False | G141363 |
| TU162491 | other | upstream | 21889 | 39764507 ~ 39765473 (-) | True | G141363 |
| TU163223 | other | upstream | 482004 | 40224622 ~ 40241404 (-) | False | LOC110489653 |
