RNA id: TCONS_00028948


Basic Information

Item Value
RNA id TCONS_00028948
length 324
RNA type mRNA
GC content 0.29
exon number 15
gene id XLOC_014649
representative True

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 14903379 ~ 14970813 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

actgaaatttgtgtgGTTTTTTGGTTTTGTTTCTTGATcccaggcatggccatcatcctttgcgatggtttaataattttttTCATAAAAAATACATCTAGcttttcctctagccggaataaaacaacaacagtaAAACATCTCGGtataatgttattattagtagtagtagcatttattatatgcatattaataattcataattttataaTAGTACAGCAACTACTGGATGTAAATAgcagtacgtttttttttttaccaacaatgcatctttgcacttcattaatATACAAAAATAGTGCTTTGAATCCAGTTCTTTTTTCT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184312

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00028947 lncRNA downstream 713293 14188120 ~ 14190086 (-) True XLOC_014648
TCONS_00030177 lncRNA downstream 836829 14062042 ~ 14066550 (-) True XLOC_014646
TCONS_00028942 lncRNA downstream 970193 13928251 ~ 13933186 (-) True XLOC_014643
TCONS_00028940 lncRNA downstream 980275 13919007 ~ 13923104 (-) True XLOC_014642
TCONS_00029758 lncRNA downstream 1446384 13452858 ~ 13456995 (-) False XLOC_014639
TCONS_00030179 lncRNA upstream 1056080 16026893 ~ 16030742 (-) False XLOC_014657
TCONS_00030178 lncRNA upstream 1056080 16026893 ~ 16030742 (-) False XLOC_014657
TCONS_00030180 lncRNA upstream 1056080 16026893 ~ 16030745 (-) False XLOC_014657
TCONS_00030182 lncRNA upstream 1056080 16026893 ~ 16030750 (-) False XLOC_014657
TCONS_00030181 lncRNA upstream 1056080 16026893 ~ 16030750 (-) False XLOC_014657
TCONS_00028946 mRNA downstream 711787 14187540 ~ 14191592 (-) False XLOC_014648
TCONS_00028945 mRNA downstream 747598 14153486 ~ 14155781 (-) True XLOC_014647
TCONS_00028944 mRNA downstream 940910 13961396 ~ 13962469 (-) True XLOC_014645
TCONS_00028943 mRNA downstream 953148 13939750 ~ 13950231 (-) True XLOC_014644
TCONS_00028941 mRNA downstream 970175 13923600 ~ 13933204 (-) False XLOC_014643
TCONS_00028950 mRNA upstream 171714 15142527 ~ 15229421 (-) False XLOC_014651
TCONS_00028951 mRNA upstream 173695 15144508 ~ 15177324 (-) False XLOC_014651
TCONS_00028952 mRNA upstream 203662 15174475 ~ 15192840 (-) False XLOC_014651
TCONS_00028953 mRNA upstream 203763 15174576 ~ 15192638 (-) False XLOC_014651
TCONS_00028955 mRNA upstream 305900 15276713 ~ 15281996 (-) True XLOC_014652
TCONS_00028935 other downstream 1128910 13733168 ~ 13774469 (-) True XLOC_014640
TCONS_00028926 other downstream 2270116 12633149 ~ 12633263 (-) True XLOC_014634
TCONS_00028921 other downstream 2510621 12386297 ~ 12392758 (-) True XLOC_014630
TCONS_00028910 other downstream 2757614 12134847 ~ 12145765 (-) True XLOC_014624
TCONS_00028954 other upstream 204030 15174843 ~ 15192646 (-) True XLOC_014651
TCONS_00028962 other upstream 1056606 16027419 ~ 16027490 (-) True XLOC_014658
TCONS_00028963 other upstream 1057643 16028456 ~ 16028590 (-) True XLOC_014659
TCONS_00028964 other upstream 1058495 16029308 ~ 16029443 (-) True XLOC_014660
TCONS_00028972 other upstream 2028814 16999627 ~ 16999742 (-) True XLOC_014664