RNA id: TU262386



Basic Information


Item Value
RNA id TU262386
length 451
RNA type TUCP
GC content 0.36
exon number 1
gene id G229373
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16839389 ~ 16839839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


ggattgaactgctgaggactggggtaaagtaattttctctgatgaatcccctttcagattgtttggggcatccggaaacaAACTTgaccagagaagacaaggtgagcgctaccatcagttctgtgtcatgccaacagtaaagcatcctgagaccattcatgtgtggggttgcttcccagccaagggagtgggctcactcacaattttgcctaagaacacagccatgaataaagaacggtaccaacacatcctccgagagcaactattgccaaccatccaggaacagtttggtgacgaacaatgccttttccagcatgatggagcaccttgccataaggcaaaagtgataactaagtggctcggggaacaaaacattgatattttgggtccatggccaggaaactccccagacctaaatcccattgagaacttgtggtcaatcctcaagagg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU262362 lncRNA downstream 38040 16800934 ~ 16801349 (-) True G229354
TU262310 lncRNA downstream 53182 16777240 ~ 16786207 (-) True G229304
TU262320 lncRNA downstream 114699 16723429 ~ 16724690 (-) True G229312
TU262270 lncRNA downstream 173704 16665191 ~ 16665685 (-) True G229274
TU262000 lncRNA downstream 653448 16185410 ~ 16185941 (-) True G229016
TU262392 lncRNA upstream 9849 16849688 ~ 16849899 (-) True G229379
TU262413 lncRNA upstream 32512 16872351 ~ 16872565 (-) True G229400
TU262428 lncRNA upstream 41983 16881822 ~ 16882595 (-) True G229415
TU262457 lncRNA upstream 58180 16898019 ~ 16898275 (-) True G229440
TU262459 lncRNA upstream 60377 16900216 ~ 16900574 (-) True G229442
XM_036970564.1 mRNA downstream 13279 16805002 ~ 16826110 (-) False cep162
XM_036970565.1 mRNA downstream 13279 16805002 ~ 16826110 (-) False cep162
XM_036970566.1 mRNA downstream 13279 16805002 ~ 16826110 (-) True cep162
XM_036970567.1 mRNA downstream 13281 16805002 ~ 16826108 (-) False cep162
XM_036970556.1 mRNA downstream 417412 16195901 ~ 16421977 (-) True LOC110512031
XM_036970571.1 mRNA upstream 235674 17075513 ~ 17188343 (-) False LOC110503762
XM_036970574.1 mRNA upstream 235674 17075513 ~ 17188344 (-) False LOC110503762
XM_036970573.1 mRNA upstream 235674 17075513 ~ 17188345 (-) False LOC110503762
XM_036970575.1 mRNA upstream 235674 17075513 ~ 17188345 (-) False LOC110503762
XM_036970568.1 mRNA upstream 235674 17075513 ~ 17188346 (-) False LOC110503762
TU261050 other downstream 1048224 15787622 ~ 15791165 (-) False G228191
TU260907 other downstream 1131124 15706234 ~ 15708265 (-) True G228098
TU260901 other downstream 1237901 15601015 ~ 15601488 (-) True G228094
TU260846 other downstream 1301074 15536365 ~ 15538315 (-) True LOC110512327
TU259832 other downstream 2202679 14598789 ~ 14636710 (-) False LOC110503689
TU262393 other upstream 10133 16849972 ~ 16850199 (-) True G229380
TU262748 other upstream 205186 17045025 ~ 17048344 (-) True G229707
TU263791 other upstream 1135406 17975245 ~ 17977909 (-) False LOC110505118
TU263980 other upstream 1253917 18093756 ~ 18131054 (-) False LOC110503747
TU263981 other upstream 1253917 18093756 ~ 18130086 (-) True LOC110503747

Expression Profile