RNA id: TU264817


Basic Information

Item Value
RNA id TU264817
length 269
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G231613
representative False

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18529086 ~ 18529392 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctgtctctctgtctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctctctctctctctctctgtctctctctctctctgtctctctgtctctctctctctctgtctctctctctctctgtctctctgtctctctctctctctgtctctctctctctctgtctctctctctctctgtctctctctctctctctctctctctctctctgtctctgtctctctctctctctctctctctctct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU264815 lncRNA downstream 3169 18525621 ~ 18525917 (-) True G231611
TU264760 lncRNA downstream 101603 18426835 ~ 18427483 (-) True G231559
TU264379 lncRNA downstream 120982 18407786 ~ 18408104 (-) True G231201
TU264376 lncRNA downstream 122365 18406428 ~ 18406721 (-) True G231198
TU264305 lncRNA downstream 221828 18306956 ~ 18307258 (-) True G231131
TU264822 lncRNA upstream 5878 18535270 ~ 18535498 (-) True G231617
TU264826 lncRNA upstream 12630 18542022 ~ 18542371 (-) True G231621
TU264853 lncRNA upstream 62079 18591471 ~ 18591679 (-) True G231646
TU264855 lncRNA upstream 63644 18593036 ~ 18593282 (-) True G231648
TU264856 lncRNA upstream 65594 18594986 ~ 18595496 (-) True G231649
XM_021592469.2 mRNA downstream 170072 18353521 ~ 18359014 (-) True LOC110511626
XM_021592464.2 mRNA downstream 170074 18353521 ~ 18359012 (-) False LOC110511626
XM_021592497.2 mRNA downstream 217586 18298739 ~ 18311500 (-) True LOC110511684
XM_021582235.2 mRNA downstream 236610 18290649 ~ 18292476 (-) True LOC110503742
XM_021592506.2 mRNA downstream 243889 18278958 ~ 18285197 (-) True LOC110511708
LOC110503735 mRNA upstream 75367 18604759 ~ 18610876 (-) False LOC110503735
XM_021592437.2 mRNA upstream 82700 18612092 ~ 18624427 (-) False laptm4b
XM_036970759.1 mRNA upstream 91174 18620566 ~ 18624427 (-) True laptm4b
XM_021592405.2 mRNA upstream 95189 18624581 ~ 18633247 (-) False LOC110511506
XM_021592410.2 mRNA upstream 95189 18624581 ~ 18633247 (-) False LOC110511506
TU263980 other downstream 398032 18093756 ~ 18131054 (-) False LOC110503747
TU263981 other downstream 399000 18093756 ~ 18130086 (-) True LOC110503747
TU263791 other downstream 551177 17975245 ~ 17977909 (-) False LOC110505118
TU262748 other downstream 1480742 17045025 ~ 17048344 (-) True G229707
TU262393 other downstream 1678887 16849972 ~ 16850199 (-) True G229380
TU264859 other upstream 70338 18599730 ~ 18601875 (-) True G231652
TU265301 other upstream 629908 19159300 ~ 19282138 (-) True LOC110511176
TU266171 other upstream 1012710 19542102 ~ 19599101 (-) False rims2a
TU266349 other upstream 1118694 19648086 ~ 19648629 (-) True G232980
TU266428 other upstream 1226812 19756204 ~ 19756618 (-) True G233052

Expression Profile