RNA id: TU264997



Basic Information


Item Value
RNA id TU264997
length 233
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G231753
representative True

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18814811 ~ 18815043 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


CTATACAACAGGATGGAGGGTAACAGAGATCAGTTAGTATACAATGACCATGGGTGAGAGAACAAACATCTTGGACAGGTGCTACTTCTTTAAGGCATAAATGGCCACTCTATCCATGTCTCTACCAACAACCAAGAAGAGGAATTGATTTGATACTGTAGGAACAATGTGACAATACCTGTCATGAAAGGTGTAGTACTTCACCTGAAAAGAACATACACATGAATAAATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU264912 lncRNA downstream 104516 18710092 ~ 18710295 (-) True G231686
TU264904 lncRNA downstream 130093 18684112 ~ 18684718 (-) True G231679
TU264902 lncRNA downstream 133523 18681037 ~ 18681288 (-) True G231677
TU264871 lncRNA downstream 191661 18610508 ~ 18623150 (-) True LOC110503735
TU264856 lncRNA downstream 219315 18594986 ~ 18595496 (-) True G231649
TU264999 lncRNA upstream 1328 18816371 ~ 18816870 (-) True G231755
TU265000 lncRNA upstream 2000 18817043 ~ 18817417 (-) True G231756
TU265001 lncRNA upstream 2497 18817540 ~ 18818396 (-) True G231757
TU265015 lncRNA upstream 50178 18865221 ~ 18866306 (-) True G231771
TU265134 lncRNA upstream 214392 19029435 ~ 19029893 (-) False G231886
XM_021592293.2 mRNA downstream 17442 18793985 ~ 18797369 (-) True LOC110511312
XM_021592290.2 mRNA downstream 17624 18793985 ~ 18797187 (-) False LOC110511312
XM_021592284.2 mRNA downstream 17635 18793985 ~ 18797176 (-) False LOC110511312
XM_021592313.2 mRNA downstream 108337 18697337 ~ 18706474 (-) True LOC110511352
XM_021592305.2 mRNA downstream 109585 18697337 ~ 18705226 (-) False LOC110511352
XM_021592238.2 mRNA upstream 11836 18826879 ~ 18835330 (-) False LOC110511207
XM_021592221.2 mRNA upstream 11836 18826879 ~ 18902473 (-) False LOC110511207
XM_021592216.2 mRNA upstream 11836 18826879 ~ 19024152 (-) False LOC110511207
XM_021592227.2 mRNA upstream 11836 18826879 ~ 19024152 (-) True LOC110511207
XM_036971043.1 mRNA upstream 250469 19065512 ~ 19282368 (-) False LOC110511176
TU264859 other downstream 212936 18599730 ~ 18601875 (-) True G231652
TU263980 other downstream 683757 18093756 ~ 18131054 (-) False LOC110503747
TU263981 other downstream 684725 18093756 ~ 18130086 (-) True LOC110503747
TU263791 other downstream 836902 17975245 ~ 17977909 (-) False LOC110505118
TU262748 other downstream 1766467 17045025 ~ 17048344 (-) True G229707
TU265301 other upstream 344257 19159300 ~ 19282138 (-) True LOC110511176
TU266171 other upstream 727059 19542102 ~ 19599101 (-) False rims2a
TU266349 other upstream 833043 19648086 ~ 19648629 (-) True G232980
TU266428 other upstream 941161 19756204 ~ 19756618 (-) True G233052
TU266934 other upstream 1736740 20551783 ~ 20551997 (-) True G233513

Expression Profile