RNA id: TCONS_00032418


Basic Information

Item Value
RNA id TCONS_00032418
length 836
RNA type mRNA
GC content 0.51
exon number 5
gene id XLOC_016476
representative False

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 30752501 ~ 30784502 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

AAAACAGCCGGTCTTTAAAAAATCCTTATGCCAACGGATGTAATCAAGGGAAAGAATATCTCTTATCTCTGGGCATACATGGTGAAATTCCCATGGGATCAGAGCGGATGGAGATGCGAAAGAGGCAGATGTCGGTGCAGCAGGAGTCGGTGGCGGGGACCACAGCACCGGCGCAGAACGAGCAGCCCGGCCAGGGAAACCGTGCCTCCAACGCCTGCTGCTTCTGTTGGTGCTGTTGCTGCAGCTGCTCCTGGAATGAAGACAGAGATGAGAGGAACCGGAGAGCCTCGTATGACTTTAAAGCAGACGGGGACGCAGACTTCGAGGAAAGtccAAAACCAACTGCGGAGGAGATCTGCCTATGGGGGCAATCCTTCGACAAACTGATGAACTGCCCCTCTGGAAGAAGTGCCTTCCGGCAGTTTCTGCGCACTGAGTTTAGTGAGGAAAACATGCTCTTCTGGTTGGCCTGCGAGGAGTTCAGAAAGGAGGCCAATAAAAGCGTCATCGAAGAGAAGGCTCGAATAATATATGAAGACTACATCTCTATTCTCTCGCCCAAAGAGGTGAGCCTCGACTCCAGAGTTCGAGAGGTTATAAACAGGAACATGCTGGAACCAACATCCCACACGTTTGATGATGCCCAGCTCCAGATATACACGCTAATGCAAAGAGACTCATACCCGCGATTCATGAACTCCCCGGTCTACAAAAACCTGCTCAAGACAGTCTCTGAAACTCAGTCGGTGGAATCTTAGATCTCTGTGATCCCGGTTGAATCCCCCCTCCCCCCTTCCCTAGCTTCGTTTGTTTTCTTTCCTTGTGTAGAATATGTT

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040718-128 Orthologous to human RGS20 (regulator of G protein signaling 20).

Ensembl:

ensembl_id ENSDART00000131230

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00033863 lncRNA downstream 410431 30329539 ~ 30346274 (-) True XLOC_016470
TCONS_00033862 lncRNA downstream 410438 30329539 ~ 30346267 (-) False XLOC_016470
TCONS_00032407 lncRNA downstream 461788 30292294 ~ 30294917 (-) True XLOC_016469
TCONS_00032404 lncRNA downstream 506959 30248856 ~ 30249746 (-) True XLOC_016468
TCONS_00033861 lncRNA downstream 572068 30183095 ~ 30184637 (-) True XLOC_016466
TCONS_00033374 lncRNA upstream 289457 31060193 ~ 31074986 (-) False XLOC_016479
TCONS_00033864 lncRNA upstream 303672 31074408 ~ 31075713 (-) True XLOC_016479
TCONS_00033375 lncRNA upstream 307118 31077854 ~ 31080324 (-) False XLOC_016480
TCONS_00033376 lncRNA upstream 307118 31077854 ~ 31098639 (-) False XLOC_016480
TCONS_00033865 lncRNA upstream 322013 31092749 ~ 31097703 (-) False XLOC_016480
TCONS_00032414 mRNA downstream 22607 30732886 ~ 30734098 (-) True XLOC_016474
TCONS_00032413 mRNA downstream 35203 30713868 ~ 30721502 (-) True XLOC_016473
TCONS_00032410 mRNA downstream 88125 30556287 ~ 30668580 (-) False XLOC_016472
TCONS_00032420 mRNA upstream 139398 30910134 ~ 30912307 (-) False XLOC_016477
TCONS_00032421 mRNA upstream 139408 30910144 ~ 30912922 (-) True XLOC_016477
TCONS_00032422 mRNA upstream 216260 30986996 ~ 30987538 (-) False XLOC_016478
TCONS_00032423 mRNA upstream 216260 30986996 ~ 31018096 (-) False XLOC_016478
TCONS_00032424 mRNA upstream 240747 31011483 ~ 31018062 (-) True XLOC_016478
TCONS_00032415 other downstream 4596 30751977 ~ 30752109 (-) True XLOC_016475
TCONS_00032402 other downstream 506957 30245934 ~ 30249748 (-) False XLOC_016468
TCONS_00032397 other downstream 575486 30181130 ~ 30181219 (-) True XLOC_016465
TCONS_00032392 other downstream 768008 29986258 ~ 29988697 (-) True XLOC_016461
TCONS_00032385 other downstream 989415 29764395 ~ 29767290 (-) True XLOC_016457
TCONS_00032428 other upstream 528534 31299270 ~ 31301354 (-) False XLOC_016481
TCONS_00032436 other upstream 840298 31611034 ~ 31612177 (-) False XLOC_016485
TCONS_00032438 other upstream 840318 31611054 ~ 31612167 (-) False XLOC_016485
TCONS_00032441 other upstream 841298 31612034 ~ 31614289 (-) False XLOC_016485
TCONS_00032442 other upstream 841300 31612036 ~ 31614391 (-) False XLOC_016485

Expression Profile

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