RNA id: TCONS_00032694


Basic Information

Item Value
RNA id TCONS_00032694
length 1126
RNA type mRNA
GC content 0.44
exon number 3
gene id XLOC_016654
representative True

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 37460640 ~ 37462462 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CAACTTCCTGATTGTAAAGGAGCTTGAGCTACTGTTCGCGAGCGCTTCGTAAACAGCTGAAGATCCAAATGATCCAACACGATGAGAGCAACATTGGGTGTGTCAAAGTGCTGAGATATCAATGGTTGCAGGAATGAGTTCTTCAGATGAGTCTTTAAAGCGCCAAAGGAATCCTCACAGGACCTGTCGCACAGACTCTACACAAGTCAACGAACCAGTTTCAGGTGGCACCGAATCAATTACTCATAATAAAAGAACCACAGCACCTCAAGATCTGATTCTTGTGAAGTCATGTGGAAGGAGAGCAACTGAGAACAAACCACAAGCAGCAAACCAAAATGCTCCTCCTTGTTTACGGAAATCAAGACGCCAGGTTACAAATATAAATGGATGTGTATCTAAAAAGTCACATCAACCTGAGCAGGTCTTGCCTCGAAAAATCGCCACCCCCAAATATCAAATAAAGACAGCTTACAagggaagaagaaaaaagaatgtTGAAGCAAGTGAGAAAAAGGTAGCTGCTAGCAAAGCTAAATTGGATGTACTAGACAATTTGTGCTCAGAACAACACTTAAGCTCTCAAAAACCTAAAAGGACACATCATCAAAACTCTAAACGAACTCAAAATCATCAGACTCCTTCTGATGTTTCGACAGGTGTTTACACGTGTACTACATTATCTCCTTGTCGTTGCAAGGAGGATTCATGCTGCCACACTAACAGACCACAAGCCCCATTACAGGACAGACTCCAGTTTACGTCTCTCCTCAGCTCCACCTCAAACTCTGACCTCAAGTCCCTGTCGCCACAAACAGGTCAGAATAGTTGTGTACCACATAGTGAGCCGGATGTCTTAAAGTCCAGCCTAGAAAAGAGACCTCCGACAGATGCCTCACCATCACCTCAGAGAGCCAGAGGAAGGCCGAAAGGCAACAATAATAAAGTACAAGAGGATCCAAGTTCTTTTCTTCCATTGAAACACAGCAGGGAGTCCACAGAGTGTCCTGTTGAATACCCAAAACGTTTTCTCCACAGCTCCTCTGACCTCCAATGCTTATCACCACAAACAGCTGAGAACAGTTGTGCTCCAAACAATCATCAGAATGCCAGAAAGTCCAGGCTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000145896

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00032693 lncRNA downstream 5158 37454533 ~ 37455482 (-) True XLOC_016653
TCONS_00033890 lncRNA downstream 44175 37413404 ~ 37416465 (-) True XLOC_016652
TCONS_00032690 lncRNA downstream 88254 37370142 ~ 37372386 (-) True XLOC_016650
TCONS_00033889 lncRNA downstream 287815 37171808 ~ 37172825 (-) True XLOC_016646
TCONS_00033888 lncRNA downstream 303040 37157201 ~ 37157600 (-) True XLOC_016645
TCONS_00032702 lncRNA upstream 107205 37569667 ~ 37577981 (-) True XLOC_016658
TCONS_00032707 lncRNA upstream 225001 37687463 ~ 37688312 (-) True XLOC_016660
TCONS_00032709 lncRNA upstream 319792 37782254 ~ 37785160 (-) False XLOC_016661
TCONS_00033385 lncRNA upstream 351201 37813663 ~ 37815304 (-) False XLOC_016662
TCONS_00033384 lncRNA upstream 351201 37813663 ~ 37815373 (-) True XLOC_016662
TCONS_00032692 mRNA downstream 2113 37449294 ~ 37458527 (-) False XLOC_016653
TCONS_00032689 mRNA downstream 59040 37365551 ~ 37401600 (-) False XLOC_016650
TCONS_00032685 mRNA downstream 107542 37307326 ~ 37353098 (-) False XLOC_016649
TCONS_00032695 mRNA upstream 954 37463416 ~ 37465517 (-) True XLOC_016655
TCONS_00032696 mRNA upstream 7114 37469576 ~ 37478418 (-) False XLOC_016656
TCONS_00032697 mRNA upstream 7152 37469614 ~ 37477654 (-) True XLOC_016656
TCONS_00032698 mRNA upstream 41782 37504244 ~ 37537904 (-) False XLOC_016657
TCONS_00032699 mRNA upstream 64211 37526673 ~ 37537887 (-) False XLOC_016657
TCONS_00032691 other downstream 51483 37405351 ~ 37409157 (-) True XLOC_016651
TCONS_00032658 other downstream 786721 36670656 ~ 36673919 (-) False XLOC_016631
TCONS_00032657 other downstream 789482 36664770 ~ 36671158 (-) False XLOC_016631
TCONS_00032643 other downstream 1128309 36332018 ~ 36332331 (-) True XLOC_016617
TCONS_00032642 other downstream 1132529 36327607 ~ 36328111 (-) True XLOC_016616
TCONS_00032743 other upstream 741479 38203941 ~ 38204793 (-) False XLOC_016682
TCONS_00032764 other upstream 1600292 39062754 ~ 39068546 (-) False XLOC_016693
TCONS_00032769 other upstream 1908349 39370811 ~ 39370927 (-) True XLOC_016694
TCONS_00032776 other upstream 2273090 39735552 ~ 39752556 (-) True XLOC_016698
TCONS_00032777 other upstream 2464499 39926961 ~ 40026622 (-) False XLOC_016700

Expression Profile

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