RNA id: TCONS_00034653



Basic Information


Item Value
RNA id TCONS_00034653
length 642
RNA type processed_transcript
GC content 0.40
exon number 6
gene id XLOC_017433
representative True

Chromosome Information


Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 32466886 ~ 32470454 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


tcgacaTGCAGGCAACGGCTTTCCTAATTAgaaattcacctgtcgtctttcatccagcaaattcatcctcgcacaacactgagatgaaggcgaagtcaccatgaaaagttaaacgtttaccgttaagctacagtaactgatgttgaaaaactgatgctaccaatcactcctcacttgattattcaagctcagattgtgatggacctggaatgcgacaccagttactcttaagacaagaaccgaataaagcacagatgtgaaGAGGtttgcagccaaactaactggagggaaggaacctttagtgtgggtgaacatactacctggatgtccaacaaaggctgcacaagagctcatttgatagcacatattctgtcctgtctacatctctgatgacctggaagtgcttcgacatcagatcatcatcatgctgctgccctttttcactgtccctttccacatcatttggccttcatcatttcctgtcttgtagcagtattttcacctgtttttaaaattgtaataatttttgatgcattaattgttgactggctttaatgatcaattgtttattagtgttctgttgctctgttatattgaataattgctactgtgttagcatggtttacacaataaacctttatt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000131813

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00034649 lncRNA upstream 64526 32270907 ~ 32402360 (+) True XLOC_017431
TCONS_00034648 lncRNA upstream 225917 32231609 ~ 32240969 (+) True XLOC_017430
TCONS_00036395 lncRNA upstream 1484316 30977338 ~ 30982570 (+) False XLOC_017420
TCONS_00034660 lncRNA downstream 31309 32501763 ~ 32506237 (+) False XLOC_017436
TCONS_00034661 lncRNA downstream 47755 32518209 ~ 32520467 (+) True XLOC_017436
TCONS_00036613 lncRNA downstream 356966 32827420 ~ 32850103 (+) True XLOC_017440
TCONS_00036614 lncRNA downstream 587330 33057784 ~ 33058544 (+) True XLOC_017441
TCONS_00036615 lncRNA downstream 1049331 33519785 ~ 33530031 (+) True XLOC_017444
TCONS_00034650 mRNA upstream 34015 32406011 ~ 32432871 (+) False XLOC_017432
TCONS_00034651 mRNA upstream 36506 32406085 ~ 32430380 (+) False XLOC_017432
TCONS_00034646 mRNA upstream 235729 32224405 ~ 32231157 (+) False XLOC_017429
TCONS_00034647 mRNA upstream 235729 32224406 ~ 32231157 (+) True XLOC_017429
TCONS_00034644 mRNA upstream 238035 32152355 ~ 32228851 (+) False XLOC_017429
TCONS_00034654 mRNA downstream 3130 32473584 ~ 32484756 (+) False XLOC_017434
TCONS_00034655 mRNA downstream 7697 32478151 ~ 32491036 (+) False XLOC_017434
TCONS_00034656 mRNA downstream 10894 32481348 ~ 32487625 (+) True XLOC_017434
TCONS_00034657 mRNA downstream 26806 32497260 ~ 32499292 (+) False XLOC_017435
TCONS_00034658 mRNA downstream 26872 32497326 ~ 32498745 (+) True XLOC_017435
TCONS_00034652 other upstream 34419 32408887 ~ 32432467 (+) True XLOC_017432
TCONS_00034641 other upstream 743389 31722252 ~ 31723497 (+) True XLOC_017426
TCONS_00034640 other upstream 1079715 31387055 ~ 31387171 (+) True XLOC_017425
TCONS_00034636 other upstream 1243859 31217539 ~ 31223027 (+) True XLOC_017422
TCONS_00034628 other upstream 1519341 30938162 ~ 30947545 (+) False XLOC_017419
TCONS_00034740 other downstream 2472917 34943371 ~ 34955260 (+) True XLOC_017481
TCONS_00034743 other downstream 2592352 35062806 ~ 35063981 (+) True XLOC_017485
TCONS_00034756 other downstream 2809542 35279996 ~ 35288971 (+) False XLOC_017488
TCONS_00034760 other downstream 2911984 35382438 ~ 35382617 (+) False XLOC_017489
TCONS_00034762 other downstream 2952244 35422698 ~ 35422827 (+) True XLOC_017490

Expression Profile


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